X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 102.76 α = 90
b = 93.13 β = 146.58
c = 123.27 γ = 90
Symmetry
Space Group C 1 2 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE -- -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.6 29.72 99.0 0.07 -- -- 2.18 -- 18561 -- 2.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
OTHER 2.6 29.72 -- -- -- 18561 992 98.9 -- 0.209 0.204 0.295 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.6 2.67 -- 48 1366 0.224 0.328 -- --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 28.72
Anisotropic B[1][1] 0.47
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.29
Anisotropic B[2][2] -0.34
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 0.35
RMS Deviations
Key Refinement Restraint Deviation
r_dihedral_angle_3_deg 19.006
r_gen_planes_other 0.001
r_gen_planes_refined 0.004
r_nbtor_refined 0.183
r_angle_refined_deg 1.448
r_mcbond_it 0.058
r_nbd_refined 0.216
r_symmetry_vdw_other 0.182
r_nbtor_other 0.088
r_angle_other_deg 0.906
r_bond_other_d 0.001
r_dihedral_angle_1_deg 6.774
r_chiral_restr 0.085
r_nbd_other 0.194
r_scbond_it 0.085
r_dihedral_angle_4_deg 16.323
r_bond_refined_d 0.012
r_symmetry_vdw_refined 0.154
r_scangle_it 0.113
r_symmetry_hbond_refined 0.182
r_dihedral_angle_2_deg 40.637
r_mcangle_it 0.088
r_xyhbond_nbd_refined 0.148
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 4748
Nucleic Acid Atoms 0
Heterogen Atoms 28
Solvent Atoms 131

Software

Software
Software Name Purpose
REFMAC refinement version: 5.2.0019F