2M8P

The structure of the W184AM185A mutant of the HIV-1 capsid protein


SOLUTION SCATTERING - SOLUTION NMR Experimental Data


Structure 2M8P has been solved using multiple methods: SOLUTION SCATTERING - SOLUTION NMR

Experimental Details
Sample Conditions
Sample Contents0.5 mM [U-13C; U-15N; U-2H] entity, 1 mM EDTA, 50 mM sodium chloride, 1 mM DTT, 20 mM sodium phosphate, 95% H2O/5% D2O
Solvent95% H2O/5% D2O
Ionic Strengthn/a
pH6.5
Pressureambient
Temperature (K)308
Experiment(s):2D 1H-15N HSQC, 2D TROSY-Artsy, 2D 1H-15N R1, 2D 1H-15N R1, 2D 1H-15N R1r, 2D 1H-15N R1r, 2D 1H-15N HetNOE, 2D 1H-15N HetNOE, 2D 1H-13C HSQC, 2D 1H-13C HSQC aliphatic, 2D 1H-13C HSQC aromatic, 3D HNCO, 3D HNCACB, 3D HNCA, 3D HN(CO)CA, 3D 1H-15N NOESY
Spectrometer Information
Manufacturer Model Field Strength
Bruker Avance 500.0
Bruker Avance 800.0
NMR Refinement
Method simulated annealing
Details This is an ensemble refinement. The MODEL entries appear in groups of 5, representing 20 ensembles. Xplor-NIH Ensemble Calculation This file contains 20 ensembles of size 5 Ensemble 1: MODEL 1, weight: 0.379 MODEL 2, weight: 0.272 MODEL 3, weight: 0.185 MODEL 4, weight: 0.114 MODEL 5, weight: 0.050 Ensemble 2: MODEL 6, weight: 0.355 MODEL 7, weight: 0.267 MODEL 8, weight: 0.191 MODEL 9, weight: 0.126 MODEL 10, weight: 0.062 Ensemble 3: MODEL 11, weight: 0.347 MODEL 12, weight: 0.265 MODEL 13, weight: 0.193 MODEL 14, weight: 0.130 MODEL 15, weight: 0.066 Ensemble 4: MODEL 16, weight: 0.207 MODEL 17, weight: 0.205 MODEL 18, weight: 0.201 MODEL 19, weight: 0.197 MODEL 20, weight: 0.190 Ensemble 5: MODEL 21, weight: 0.221 MODEL 22, weight: 0.212 MODEL 23, weight: 0.203 MODEL 24, weight: 0.191 MODEL 25, weight: 0.173 Ensemble 6: MODEL 26, weight: 0.364 MODEL 27, weight: 0.269 MODEL 28, weight: 0.189 MODEL 29, weight: 0.121 MODEL 30, weight: 0.057 Ensemble 7: MODEL 31, weight: 0.220 MODEL 32, weight: 0.212 MODEL 33, weight: 0.203 MODEL 34, weight: 0.191 MODEL 35, weight: 0.173 Ensemble 8: MODEL 36, weight: 0.366 MODEL 37, weight: 0.269 MODEL 38, weight: 0.188 MODEL 39, weight: 0.120 MODEL 40, weight: 0.056 Ensemble 9: MODEL 41, weight: 0.219 MODEL 42, weight: 0.212 MODEL 43, weight: 0.203 MODEL 44, weight: 0.192 MODEL 45, weight: 0.174 Ensemble 10: MODEL 46, weight: 0.264 MODEL 47, weight: 0.234 MODEL 48, weight: 0.204 MODEL 49, weight: 0.172 MODEL 50, weight: 0.127 Ensemble 11: MODEL 51, weight: 0.233 MODEL 52, weight: 0.219 MODEL 53, weight: 0.204 MODEL 54, weight: 0.186 MODEL 55, weight: 0.159 Ensemble 12: MODEL 56, weight: 0.218 MODEL 57, weight: 0.211 MODEL 58, weight: 0.203 MODEL 59, weight: 0.192 MODEL 60, weight: 0.175 Ensemble 13: MODEL 61, weight: 0.096 MODEL 62, weight: 0.122 MODEL 63, weight: 0.159 MODEL 64, weight: 0.221 MODEL 65, weight: 0.403 Ensemble 14: MODEL 66, weight: 0.333 MODEL 67, weight: 0.260 MODEL 68, weight: 0.196 MODEL 69, weight: 0.137 MODEL 70, weight: 0.074 Ensemble 15: MODEL 71, weight: 0.083 MODEL 72, weight: 0.109 MODEL 73, weight: 0.149 MODEL 74, weight: 0.218 MODEL 75, weight: 0.442 Ensemble 16: MODEL 76, weight: 0.256 MODEL 77, weight: 0.231 MODEL 78, weight: 0.204 MODEL 79, weight: 0.175 MODEL 80, weight: 0.134 Ensemble 17: MODEL 81, weight: 0.298 MODEL 82, weight: 0.248 MODEL 83, weight: 0.201 MODEL 84, weight: 0.154 MODEL 85, weight: 0.098 Ensemble 18: MODEL 86, weight: 0.223 MODEL 87, weight: 0.214 MODEL 88, weight: 0.203 MODEL 89, weight: 0.190 MODEL 90, weight: 0.170 Ensemble 19: MODEL 91, weight: 0.097 MODEL 92, weight: 0.122 MODEL 93, weight: 0.159 MODEL 94, weight: 0.221 MODEL 95, weight: 0.401 Ensemble 20: MODEL 96, weight: 0.334 MODEL 97, weight: 0.261 MODEL 98, weight: 0.196 MODEL 99, weight: 0.136 MODEL 100, weight: 0.073
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 480
Conformers Submitted Total Number 100
Representative Model Choice Rationale
1 lowest energy
Computation: NMR Software
# Classification Software Name Author
1 refinement version: 2.32 X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore
2 collection version: 1.3 TopSpin Bruker Biospin
3 data analysis version: 2.2.2 CCPN-Analysis (CCPN-Analysis)-Vranken, Boucher, Stevens..Laue.