X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 84.51 α = 90
b = 50.83 β = 116.67
c = 87.61 γ = 90
Symmetry
Space Group C 1 2 1

Diffraction

Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD MARRESEARCH -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 32-ID 0.9795 APS 32-ID

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.7 42.22 97.6 0.115 -- -- 7.3 35908 35908 -- -- --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.7 1.79 97.6 0.747 -- 2.0 7.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
Se-Met SAD phasing 1.8 42.22 -- 0.0 -- 30360 1528 -- -- -- 0.238 0.28 --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 30.116
Anisotropic B[1][1] -0.39
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] -0.603
Anisotropic B[2][2] 1.277
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -1.429
RMS Deviations
Key Refinement Restraint Deviation
p_bond_d 0.005
p_angle_d 1.272
p_mcangle_it 3.744
p_scangle_it 5.54
p_chiral_restr 0.1
p_scbond_it 3.859
p_mcbond_it 2.189
p_planar_tor 1.12
p_plane_restr 0.005
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2532
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 244

Software

Software
Software Name Purpose
DENZO data reduction
SCALA data scaling
TRUNCATE data reduction
REFMAC refinement version: 4.0
CCP4 data scaling version: (SCALA
TRUNCATE data scaling