5J4D

E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon


Macromolecule Annotations for the Entities in PDB 5J4D

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,FB 16S ribosomal RNA (5J4D:A,FB)
  • none
  • none
  • none
B,GB 25S ribosomal RNA (5J4D:B,GB)
  • none
  • none
  • none
C,HB 5S ribosomal RNA (5J4D:C,HB)
  • none
  • none
  • none
D,IA,IB,NC tRNA (5J4D:D,IA,IB,NC)
  • none
  • none
  • none
E,JB 50S ribosomal protein L2 (5J4D:E,JB)
F,KB 50S ribosomal protein L3 (5J4D:F,KB)
G,LB 50S ribosomal protein L4 (5J4D:G,LB)
H,MB 50S ribosomal protein L5 (5J4D:H,MB)
I,NB 50S ribosomal protein L6 (5J4D:I,NB)
J,OB 50S ribosomal protein L9 (5J4D:J,OB)
K,PB 50S ribosomal protein L13 (5J4D:K,PB)
L,QB 50S ribosomal protein L14 (5J4D:L,QB)
M,RB 50S ribosomal protein L15 (5J4D:M,RB)
N,SB 50S ribosomal protein L16 (5J4D:N,SB)
O,TB 50S ribosomal protein L17 (5J4D:O,TB)
P,UB 50S ribosomal protein L18 (5J4D:P,UB)
Q,VB 50S ribosomal protein L19 (5J4D:Q,VB)
R,WB 50S ribosomal protein L20 (5J4D:R,WB)
S,XB 50S ribosomal protein L21 (5J4D:S,XB)
T,YB 50S ribosomal protein L22 (5J4D:T,YB)
U,ZB 50S ribosomal protein L23 (5J4D:U,ZB)
AC,V 50S ribosomal protein L24 (5J4D:AC,V)
  • none
  • none
  • none
BC,W 50S ribosomal protein L25 (5J4D:BC,W)
  • none
  • none
  • none
CC,X 50S ribosomal protein L27 (5J4D:CC,X)
  • none
  • none
  • none
DC,Y 50S ribosomal protein L28 (5J4D:DC,Y)
  • none
  • none
  • none
EC,Z 50S ribosomal protein L29 (5J4D:EC,Z)
AA,FC 50S ribosomal protein L30 (5J4D:AA,FC)
  • none
  • none
  • none
BA,GC 50S ribosomal protein L31 (5J4D:BA,GC)
  • none
  • none
  • none
CA,HC 50S ribosomal protein L32 (5J4D:CA,HC)
  • none
  • none
  • none
DA,IC 50S ribosomal protein L33 (5J4D:DA,IC)
  • none
  • none
  • none
EA,JC 50S ribosomal protein L34 (5J4D:EA,JC)
FA,KC 50S ribosomal protein L35 (5J4D:FA,KC)
GA,LC 50S ribosomal protein L36 (5J4D:GA,LC)
HA,MC mRNA (5J4D:HA,MC)
JA,OC Peptide chain release factor 1 (5J4D:JA,OC)
KA,PC 30S ribosomal protein S2 (5J4D:KA,PC)
LA,QC 30S ribosomal protein S3 (5J4D:LA,QC)
MA,RC 30S ribosomal protein S4 (5J4D:MA,RC)
NA,SC 30S ribosomal protein S5 (5J4D:NA,SC)
OA,TC 30S ribosomal protein S6 (5J4D:OA,TC)
PA,UC 30S ribosomal protein S7 (5J4D:PA,UC)
QA,VC 30S ribosomal protein S8 (5J4D:QA,VC)
RA,WC 30S ribosomal protein S9 (5J4D:RA,WC)
SA,XC 30S ribosomal protein S10 (5J4D:SA,XC)
TA,YC 30S ribosomal protein S11 (5J4D:TA,YC)
UA,ZC 30S ribosomal protein S12 (5J4D:UA,ZC)
AD,VA 30S ribosomal protein S13 (5J4D:AD,VA)
  • none
  • none
  • none
BD,WA 30S ribosomal protein S14 type Z (5J4D:BD,WA)
  • none
  • none
  • none
CD,XA 30S ribosomal protein S15 (5J4D:CD,XA)
  • none
  • none
  • none
DD,YA 30S ribosomal protein S16 (5J4D:DD,YA)
  • none
  • none
  • none
ED,ZA 30S ribosomal protein S17 (5J4D:ED,ZA)
AB,FD 30S ribosomal protein S18 (5J4D:AB,FD)
  • none
  • none
  • none
BB,GD 30S ribosomal protein S19 (5J4D:BB,GD)
  • none
  • none
  • none
CB,HD 30S ribosomal protein S20 (5J4D:CB,HD)
  • none
  • none
  • none
DB,ID 30S ribosomal protein Thx (5J4D:DB,ID)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description