Macromolecule Annotations for the Entities in PDB 2CK3

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
D358-475 d2ck3d1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 Rat (Rattus norvegicus) [TaxId: 10116]
D10-81 d2ck3d2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 Rat (Rattus norvegicus) [TaxId: 10116]
D82-357 d2ck3d3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase Rat (Rattus norvegicus) [TaxId: 10116]
E358-474 d2ck3e1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 Rat (Rattus norvegicus) [TaxId: 10116]
E10-81 d2ck3e2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 Rat (Rattus norvegicus) [TaxId: 10116]
E82-357 d2ck3e3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase Rat (Rattus norvegicus) [TaxId: 10116]
F358-474 d2ck3f1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 Rat (Rattus norvegicus) [TaxId: 10116]
F10-81 d2ck3f2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 Rat (Rattus norvegicus) [TaxId: 10116]
F82-357 d2ck3f3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase Rat (Rattus norvegicus) [TaxId: 10116]
G1-270 d2ck3g1 Alpha and beta proteins (a/b) Pyruvate kinase C-terminal domain-like ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit Cow (Bos taurus) [TaxId: 9913]
H102-140 d2ck3h1 All alpha proteins Long alpha-hairpin Epsilon subunit of F1F0-ATP synthase C-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain Cow (Bos taurus) [TaxId: 9913]
H17-101 d2ck3h2 All beta proteins Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase N-terminal domain Cow (Bos taurus) [TaxId: 9913]
A380-510 d2ck3a1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 Cow (Bos taurus) [TaxId: 9913]
A24-94 d2ck3a2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 Cow (Bos taurus) [TaxId: 9913]
A95-379 d2ck3a3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase Cow (Bos taurus) [TaxId: 9913]
B380-510 d2ck3b1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 Cow (Bos taurus) [TaxId: 9913]
B24-94 d2ck3b2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 Cow (Bos taurus) [TaxId: 9913]
B95-379 d2ck3b3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase Cow (Bos taurus) [TaxId: 9913]
C380-510 d2ck3c1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 Cow (Bos taurus) [TaxId: 9913]
C24-94 d2ck3c2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase- like N-terminal domain of alpha and beta subunits of F1 ATP synthase N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 Cow (Bos taurus) [TaxId: 9913]
C95-379 d2ck3c3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase Cow (Bos taurus) [TaxId: 9913]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 2ck3A01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
A2 2ck3A02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
A3 2ck3A03 Mainly Alpha Up-down Bundle Lysin
B1 2ck3B01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
B2 2ck3B02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
B3 2ck3B03 Mainly Alpha Up-down Bundle Lysin
C1 2ck3C01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
C2 2ck3C02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
C3 2ck3C03 Mainly Alpha Up-down Bundle Lysin
D1 2ck3D01 Mainly Beta Beta Barrel Thrombin, subunit H
D2 2ck3D02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
D3 2ck3D03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
E1 2ck3E01 Mainly Beta Beta Barrel Thrombin, subunit H
E2 2ck3E02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
E3 2ck3E03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
F1 2ck3F01 Mainly Beta Beta Barrel Thrombin, subunit H
F2 2ck3F02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
F3 2ck3F03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
G1 2ck3G01 Mainly Alpha Orthogonal Bundle Helix Hairpins
G2 2ck3G02 Alpha Beta 3-Layer(aba) Sandwich Pyruvate Kinase; Chain: A, domain 1
H2 2ck3H02 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix- helix interfaces

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL (2CK3:A,B,C)
D,E,F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL (2CK3:D,E,F)
G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL (2CK3:G)
H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL (2CK3:H)
I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL (2CK3:I)

Protein Modification Annotation

Type PDB Residue Nr. Description