Macromolecule Annotations for the Entities in PDB 2A6H

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1-49,A173-229 d2a6ha1 Alpha and beta proteins (a+b) DCoH-like RBP11-like subunits of RNA polymerase RNA polymerase alpha subunit dimerisation domain RNA polymerase alpha Thermus thermophilus [TaxId: 274]
A50-172 d2a6ha2 Alpha and beta proteins (a+b) Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit RNA polymerase alpha subunit Thermus thermophilus [TaxId: 274]
B1-49,B173-229 d2a6hb1 Alpha and beta proteins (a+b) DCoH-like RBP11-like subunits of RNA polymerase RNA polymerase alpha subunit dimerisation domain RNA polymerase alpha Thermus thermophilus [TaxId: 274]
B50-172 d2a6hb2 Alpha and beta proteins (a+b) Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit RNA polymerase alpha subunit Thermus thermophilus [TaxId: 274]
C1-1119 d2a6hc1 Multi-domain proteins (alpha and beta) beta and beta-prime subunits of DNA dependent RNA- polymerase beta and beta-prime subunits of DNA dependent RNA- polymerase RNA-polymerase beta RNA-polymerase beta Thermus thermophilus [TaxId: 274]
D2-1505 d2a6hd1 Multi-domain proteins (alpha and beta) beta and beta-prime subunits of DNA dependent RNA- polymerase beta and beta-prime subunits of DNA dependent RNA- polymerase RNA-polymerase beta-prime RNA-polymerase beta-prime Thermus thermophilus [TaxId: 274]
E2-96 d2a6he1 All alpha proteins RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit RNA polymerase omega subunit Thermus thermophilus [TaxId: 274]
F258-318 d2a6hf1 All alpha proteins DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 domain Sigma70 Thermus thermophilus [TaxId: 274]
F319-423 d2a6hf2 All alpha proteins DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Sigma70 (SigA, RpoD) Thermus thermophilus [TaxId: 274]
F74-257 d2a6hf3 All alpha proteins Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma70 Thermus thermophilus [TaxId: 274]
K1-49,K173-229 d2a6hk1 Alpha and beta proteins (a+b) DCoH-like RBP11-like subunits of RNA polymerase RNA polymerase alpha subunit dimerisation domain RNA polymerase alpha Thermus thermophilus [TaxId: 274]
K50-172 d2a6hk2 Alpha and beta proteins (a+b) Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit RNA polymerase alpha subunit Thermus thermophilus [TaxId: 274]
L1-49,L173-229 d2a6hl1 Alpha and beta proteins (a+b) DCoH-like RBP11-like subunits of RNA polymerase RNA polymerase alpha subunit dimerisation domain RNA polymerase alpha Thermus thermophilus [TaxId: 274]
L50-172 d2a6hl2 Alpha and beta proteins (a+b) Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit RNA polymerase alpha subunit Thermus thermophilus [TaxId: 274]
M1-1119 d2a6hm1 Multi-domain proteins (alpha and beta) beta and beta-prime subunits of DNA dependent RNA- polymerase beta and beta-prime subunits of DNA dependent RNA- polymerase RNA-polymerase beta RNA-polymerase beta Thermus thermophilus [TaxId: 274]
N2-1505 d2a6hn1 Multi-domain proteins (alpha and beta) beta and beta-prime subunits of DNA dependent RNA- polymerase beta and beta-prime subunits of DNA dependent RNA- polymerase RNA-polymerase beta-prime RNA-polymerase beta-prime Thermus thermophilus [TaxId: 274]
O2-96 d2a6ho1 All alpha proteins RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit RNA polymerase omega subunit Thermus thermophilus [TaxId: 274]
P258-318 d2a6hp1 All alpha proteins DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 domain Sigma70 Thermus thermophilus [TaxId: 274]
P319-423 d2a6hp2 All alpha proteins DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Sigma70 (SigA, RpoD) Thermus thermophilus [TaxId: 274]
P74-257 d2a6hp3 All alpha proteins Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma70 Thermus thermophilus [TaxId: 274]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 2a6hA01 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2
A2 2a6hA02 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 RNA Polymerase Alpha Subunit; Chain A, domain 2
B1 2a6hB01 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2
B2 2a6hB02 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 RNA Polymerase Alpha Subunit; Chain A, domain 2
C1 2a6hC01 Mainly Beta Beta Barrel Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6
C2 2a6hC02 Alpha Beta Alpha-Beta Complex Rna Polymerase Beta Subunit; Chain: C,domain 2
C3 2a6hC03 Alpha Beta Alpha-Beta Complex Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3
C4 2a6hC04 Mainly Beta Roll Rna Polymerase Beta Subunit; Chain: C, domain 4
C5 2a6hC05 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
C6 2a6hC06 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
E 2a6hE00 Alpha Beta Alpha-Beta Complex Eukaryotic RPB6 RNA polymerase subunit
F2 2a6hF02 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A "winged helix" repressor DNA binding domain
K1 2a6hK01 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2
K2 2a6hK02 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 RNA Polymerase Alpha Subunit; Chain A, domain 2
L1 2a6hL01 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2
L2 2a6hL02 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 RNA Polymerase Alpha Subunit; Chain A, domain 2
M1 2a6hM01 Mainly Beta Beta Barrel Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6
M2 2a6hM02 Alpha Beta Alpha-Beta Complex Rna Polymerase Beta Subunit; Chain: C,domain 2
M3 2a6hM03 Alpha Beta Alpha-Beta Complex Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3
M4 2a6hM04 Mainly Beta Roll Rna Polymerase Beta Subunit; Chain: C, domain 4
M5 2a6hM05 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
M6 2a6hM06 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
O 2a6hO00 Alpha Beta Alpha-Beta Complex Eukaryotic RPB6 RNA polymerase subunit
P2 2a6hP02 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A "winged helix" repressor DNA binding domain

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Protein Modification Annotation

Type PDB Residue Nr. Description