Macromolecule Annotations for the Entities in PDB 1WDD

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A151-475 d1wdda1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Rice (Oryza sativa) [TaxId: 4530]
A11-150 d1wdda2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Rice (Oryza sativa) [TaxId: 4530]
E151-475 d1wdde1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Rice (Oryza sativa) [TaxId: 4530]
E12-150 d1wdde2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Rice (Oryza sativa) [TaxId: 4530]
S d1wdds_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Rice (Oryza sativa) [TaxId: 4530]
W d1wddw_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Rice (Oryza sativa) [TaxId: 4530]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1wddA01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
A2 1wddA02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
E1 1wddE01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
E2 1wddE02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
S 1wddS00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
W 1wddW00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,E Ribulose bisphosphate carboxylase large chain (1WDD:A,E)
S,W Ribulose bisphosphate carboxylase small chain C (1WDD:S,W)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description