Macromolecule Annotations for the Entities in PDB 1VG9

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A3-444,A558-606 d1vg9a1 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain GDI-like N domain Rab escort protein 1 Rat (Rattus norvegicus) [TaxId: 10116]
A445-557 d1vg9a2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain GDI-like Rab escort protein 1 Rat (Rattus norvegicus) [TaxId: 10116]
B d1vg9b_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Rab7 Rat (Rattus norvegicus) [TaxId: 10116]
C3-444,C558-606 d1vg9c1 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain GDI-like N domain Rab escort protein 1 Rat (Rattus norvegicus) [TaxId: 10116]
C445-557 d1vg9c2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain GDI-like Rab escort protein 1 Rat (Rattus norvegicus) [TaxId: 10116]
D d1vg9d_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Rab7 Rat (Rattus norvegicus) [TaxId: 10116]
E3-444,E558-606 d1vg9e1 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain GDI-like N domain Rab escort protein 1 Rat (Rattus norvegicus) [TaxId: 10116]
E445-557 d1vg9e2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain GDI-like Rab escort protein 1 Rat (Rattus norvegicus) [TaxId: 10116]
F d1vg9f_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Rab7 Rat (Rattus norvegicus) [TaxId: 10116]
G3-444,G558-606 d1vg9g1 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain GDI-like N domain Rab escort protein 1 Rat (Rattus norvegicus) [TaxId: 10116]
G445-557 d1vg9g2 Alpha and beta proteins (a+b) FAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain GDI-like Rab escort protein 1 Rat (Rattus norvegicus) [TaxId: 10116]
H d1vg9h_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Rab7 Rat (Rattus norvegicus) [TaxId: 10116]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1vg9A01 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain
A2 1vg9A02 Alpha Beta 2-Layer Sandwich Guanine Nucleotide Dissociation Inhibitor; domain 2 Guanine Nucleotide Dissociation Inhibitor, domain 2
A3 1vg9A03 Mainly Alpha Orthogonal Bundle Guanine Nucleotide Dissociation Inhibitor; domain 1 Guanine Nucleotide Dissociation Inhibitor, domain 1
B 1vg9B00 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
C1 1vg9C01 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain
C2 1vg9C02 Alpha Beta 2-Layer Sandwich Guanine Nucleotide Dissociation Inhibitor; domain 2 Guanine Nucleotide Dissociation Inhibitor, domain 2
C3 1vg9C03 Mainly Alpha Orthogonal Bundle Guanine Nucleotide Dissociation Inhibitor; domain 1 Guanine Nucleotide Dissociation Inhibitor, domain 1
D 1vg9D00 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
E1 1vg9E01 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain
E2 1vg9E02 Alpha Beta 2-Layer Sandwich Guanine Nucleotide Dissociation Inhibitor; domain 2 Guanine Nucleotide Dissociation Inhibitor, domain 2
E3 1vg9E03 Mainly Alpha Orthogonal Bundle Guanine Nucleotide Dissociation Inhibitor; domain 1 Guanine Nucleotide Dissociation Inhibitor, domain 1
F 1vg9F00 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
G1 1vg9G01 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain
G2 1vg9G02 Alpha Beta 2-Layer Sandwich Guanine Nucleotide Dissociation Inhibitor; domain 2 Guanine Nucleotide Dissociation Inhibitor, domain 2
G3 1vg9G03 Mainly Alpha Orthogonal Bundle Guanine Nucleotide Dissociation Inhibitor; domain 1 Guanine Nucleotide Dissociation Inhibitor, domain 1
H 1vg9H00 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Protein Modification Annotation

Type PDB Residue Nr. Description