Macromolecule Annotations for the Entities in PDB 1RZT

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A249-328 d1rzta1 All alpha proteins SAM domain-like DNA polymerase beta, N-terminal domain-like DNA polymerase beta, N-terminal domain-like DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
A329-385 d1rzta2 All alpha proteins SAM domain-like PsbU/PolX domain-like DNA polymerase beta-like, second domain DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
A386-575 d1rzta3 Alpha and beta proteins (a+b) Nucleotidyltransferase Nucleotidyltransferase DNA polymerase beta-like DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
E250-328 d1rzte1 All alpha proteins SAM domain-like DNA polymerase beta, N-terminal domain-like DNA polymerase beta, N-terminal domain-like DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
E329-385 d1rzte2 All alpha proteins SAM domain-like PsbU/PolX domain-like DNA polymerase beta-like, second domain DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
E386-575 d1rzte3 Alpha and beta proteins (a+b) Nucleotidyltransferase Nucleotidyltransferase DNA polymerase beta-like DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
I250-328 d1rzti1 All alpha proteins SAM domain-like DNA polymerase beta, N-terminal domain-like DNA polymerase beta, N-terminal domain-like DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
I329-385 d1rzti2 All alpha proteins SAM domain-like PsbU/PolX domain-like DNA polymerase beta-like, second domain DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
I386-575 d1rzti3 Alpha and beta proteins (a+b) Nucleotidyltransferase Nucleotidyltransferase DNA polymerase beta-like DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
M249-328 d1rztm1 All alpha proteins SAM domain-like DNA polymerase beta, N-terminal domain-like DNA polymerase beta, N-terminal domain-like DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
M329-385 d1rztm2 All alpha proteins SAM domain-like PsbU/PolX domain-like DNA polymerase beta-like, second domain DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]
M386-575 d1rztm3 Alpha and beta proteins (a+b) Nucleotidyltransferase Nucleotidyltransferase DNA polymerase beta-like DNA polymerase lambda Human (Homo sapiens) [TaxId: 9606]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1rztA01 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1 DNA polymerase beta, N-terminal domain-like
A2 1rztA02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1 5' to 3' exonuclease, C-terminal subdomain
A3 1rztA03 Alpha Beta 2-Layer Sandwich Beta Polymerase; domain 2 Beta Polymerase, domain 2
A4 1rztA04 Alpha Beta 2-Layer Sandwich Beta Polymerase; domain 3 Beta Polymerase, domain 3
E1 1rztE01 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1 DNA polymerase beta, N-terminal domain-like
E2 1rztE02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1 5' to 3' exonuclease, C-terminal subdomain
E3 1rztE03 Alpha Beta 2-Layer Sandwich Beta Polymerase; domain 2 Beta Polymerase, domain 2
E4 1rztE04 Alpha Beta 2-Layer Sandwich Beta Polymerase; domain 3 Beta Polymerase, domain 3
I1 1rztI01 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1 DNA polymerase beta, N-terminal domain-like
I2 1rztI02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1 5' to 3' exonuclease, C-terminal subdomain
I3 1rztI03 Alpha Beta 2-Layer Sandwich Beta Polymerase; domain 2 Beta Polymerase, domain 2
I4 1rztI04 Alpha Beta 2-Layer Sandwich Beta Polymerase; domain 3 Beta Polymerase, domain 3
M1 1rztM01 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1 DNA polymerase beta, N-terminal domain-like
M2 1rztM02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1 5' to 3' exonuclease, C-terminal subdomain
M3 1rztM03 Alpha Beta 2-Layer Sandwich Beta Polymerase; domain 2 Beta Polymerase, domain 2
M4 1rztM04 Alpha Beta 2-Layer Sandwich Beta Polymerase; domain 3 Beta Polymerase, domain 3

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
B,F,J,N 5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3' (1RZT:B,F,J,N)
  • none
  • none
  • none
C,G,K,O 5'-D(*GP*TP*GP*CP*G)-3' (1RZT:C,G,K,O)
  • none
  • none
  • none
D,H,L,P 5'-D(P*GP*CP*CP*G)-3' (1RZT:D,H,L,P)
  • none
  • none
  • none
A,E,I,M DNA polymerase lambda (1RZT:A,E,I,M)

Protein Modification Annotation

Type PDB Residue Nr. Description