Macromolecule Annotations for the Entities in PDB 1K8K

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A3-160 d1k8ka1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Actin-like ATPase domain Actin/HSP70 Actin-related protein 3, Arp3 Cow (Bos taurus) [TaxId: 9913]
A161-418 d1k8ka2 Alpha and beta proteins (a/b) Ribonuclease H-like motif Actin-like ATPase domain Actin/HSP70 Actin-related protein 3, Arp3 Cow (Bos taurus) [TaxId: 9913]
B154-343 d1k8kb1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Actin-like ATPase domain Actin/HSP70 Actin-related protein 2, Arp2 Cow (Bos taurus) [TaxId: 9913]
C d1k8kc_ All beta proteins 7-bladed beta-propeller WD40 repeat-like WD40-repeat Arp2/3 complex 41 kDa subunit ARPC1 Cow (Bos taurus) [TaxId: 9913]
D1-120 d1k8kd1 Alpha and beta proteins (a+b) Secretion chaperone-like Arp2/3 complex subunits Arp2/3 complex subunits ARPC2 (34 kDa subunit) Cow (Bos taurus) [TaxId: 9913]
D121-284 d1k8kd2 Alpha and beta proteins (a+b) Secretion chaperone-like Arp2/3 complex subunits Arp2/3 complex subunits ARPC2 (34 kDa subunit) Cow (Bos taurus) [TaxId: 9913]
E d1k8ke_ All alpha proteins Arp2/3 complex 21 kDa subunit ARPC3 Arp2/3 complex 21 kDa subunit ARPC3 Arp2/3 complex 21 kDa subunit ARPC3 Arp2/3 complex 21 kDa subunit ARPC3 Cow (Bos taurus) [TaxId: 9913]
F d1k8kf_ Alpha and beta proteins (a+b) Secretion chaperone-like Arp2/3 complex subunits Arp2/3 complex subunits ARPC4 (20 kDa subunit) Cow (Bos taurus) [TaxId: 9913]
G d1k8kg_ All alpha proteins alpha-alpha superhelix Arp2/3 complex 16 kDa subunit ARPC5 Arp2/3 complex 16 kDa subunit ARPC5 Arp2/3 complex 16 kDa subunit ARPC5 Cow (Bos taurus) [TaxId: 9913]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1k8kA01 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase; domain 5
A2 1k8kA02 Mainly Beta Roll Actin; Chain A, domain 2 Actin; Chain A, domain 2
A3 1k8kA03 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase; domain 5
A4 1k8kA04 Alpha Beta Alpha-Beta Complex Actin; Chain A, domain 4 Actin; Chain A, domain 4
B1 1k8kB01 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase; domain 5
B2 1k8kB02 Alpha Beta Alpha-Beta Complex Actin; Chain A, domain 4 Actin; Chain A, domain 4
C 1k8kC00 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
D1 1k8kD01 Alpha Beta 2-Layer Sandwich Yope Regulator; Chain: A,
D2 1k8kD02 Alpha Beta 2-Layer Sandwich Yope Regulator; Chain: A,
E 1k8kE00 Mainly Alpha Orthogonal Bundle Arp2/3 complex 21 kDa subunit ARPC3 Arp2/3 complex 21 kDa subunit ARPC3
F 1k8kF00 Alpha Beta 2-Layer Sandwich Yope Regulator; Chain: A,
G 1k8kG00 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A ACTIN-LIKE PROTEIN 3 (1K8K:A)
B ACTIN-LIKE PROTEIN 2 (1K8K:B)
C ARP2/3 COMPLEX 41 KDA SUBUNIT (1K8K:C)
D ARP2/3 COMPLEX 34 KDA SUBUNIT (1K8K:D)
E ARP2/3 COMPLEX 21 KDA SUBUNIT (1K8K:E)
F ARP2/3 COMPLEX 20 KDA SUBUNIT (1K8K:F)
G ARP2/3 COMPLEX 16 KDA SUBUNIT (1K8K:G)

Protein Modification Annotation

Type PDB Residue Nr. Description