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PDB ID Mentions in PubMed Central Article count: 1

Citations in PubMed

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PDB ID Mentions in PubMed Central

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Expressing the human proteome for affinity proteomics: optimising expression of soluble protein domains and in vivo biotinylation.

(2012) N Biotechnol 29

PubMed: 22027370 | PubMedCentral: PMC3383991 | DOI: 10.1016/j.nbt.2011.10.007

Table 2 Expression of soluble domains of newly introduced targets Target gene/Uniprot ID Soluble constructs/tested Domains produced (aa range) Prior status N-His C-His His/Trx Baculo AMPH/ P49418 5/7 ... /8 4/8 8/8 BAR domain (aa34–236) 67% identity to human Bin1 [21] CNO/ Q9NUP1 2/7 0/9 5/7 3/7 (aa1–217) None reported ETV1/ P50549 5/8 0 7/7 7/7 PEA3, ETS-N-terminal domain (aa223–326) Short homology to ets-1 HCK (SH2-SH3)/ P08631 6/8 2/8 5/8 4/7 SH3 domain (aa72–138) Structure solved (PDB:3NHN) [22] HMHA1/ Q8IYN3 3/13 (weak) 1/12 5/13 FCH: Fes/CIP4 homology domain (aa254–521) 31% homology in RhoGAP domain INADL/ Q8NI35 3/5 1/6 2/5 4/5 PDZ 2 + 3 (aa254–530) PDZ domain structures solved by NMR (PDB 2DB5, 2DMZ and 2DAZ) MSX2/ P35548 5/8 2/9 7/8 3/8 Homeobox domain (aa143–211) Highly homologous to MSX1 in homeobox RBM3/ P98179 6/6 5/6 6/6 6/6 RRM1 (aa1–106) 68% identity to closest PDB homologue 1X5S RCC1/ P18754 0/1 1/1 1/1 1/1 Full-length RCC1 (aa1–421) Structure solved (PDB:1A12) [23] TEX9/ Q8N6V9 0/3 2/4 (weak) (weak) (aa172–391) None reported PLEKHH1/ Q9ULM0 0/16 0/16 4/16 ND Refolded MyTH4 domain (aa832–990) None reported HCK (kinase)/ P08631 0/4 ND 5/6 (weak) SH3_SH2_Kinase (aa72–526) Structure solved (PDB:1QCF); expressed in mammalian cells [24] Secreted proteins Target gene E. coli Baculo SPON1/ Q9HCB6 1/3 1/6 Spondin_N domain(aa194–413) Structure solved (aa1–200), PDB:3COO [25] CST3/ P01034 1/1 1/1 Cystatin domain (aa27–146) Structure solved (PDB: 1G96).

Publication Year: 2012