4RL8

Crystal structure of the COG4313 outer membrane channel from Pseudomonas putida F1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 4RL8

Classification: MEMBRANE PROTEIN

Total Structure Weight: 130561.80

Macromolecule Entities
Molecule Chains Length Organism Details
Protein involved in meta-pathway of phenol degradation-like protein A, B, C, D 275 Pseudomonas putida Gene Name(s): Pput_2725
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Beta-Barrel Membrane Proteins: Porins and Relatives

Protein Name: COG4313 outer membrane channel


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
C8E
Query on C8E

A, B, C, D (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
C16 H34 O5
FEOZZFHAVXYAMB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.213
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 101.05 α = 90.00
b = 120.31 β = 90.00
c = 131.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-10-16
  • Released Date: 2015-07-29
  • Deposition author(s): van den Berg, B.

Revision History

  • Version 1_0: 2015-07-29

    Type: Initial release