3O0E

Crystal structure of OmpF in complex with colicin peptide OBS1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.01 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 3O0E

Classification: MEMBRANE PROTEIN

Total Structure Weight: 232323.00

Macromolecule Entities
Molecule Chains Length Organism Details
Outer membrane porin 1a (Ia;b;F) A, B, C..., D, E, FA, B, C, D, E, F 340 Escherichia coli Gene Name(s): ompF cmlB coa cry tolF b0929 JW0912
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Colicin-E9 L, M, N..., O, P, QL, M, N, O, P, Q 17 Escherichia coli EC#: 3.1 IUBMB
Fragment: UNP Residues 2-18
Gene Name(s): col cei
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Beta-Barrel Membrane Proteins: Porins and Relatives

Protein Name: OmpF Porin


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BOG
Query on BOG

F B-OCTYLGLUCOSIDE
C14 H28 O6
HEGSGKPQLMEBJL-RKQHYHRCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.01 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.208
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 101.49 α = 90.00
b = 101.62 β = 94.46
c = 162.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-07-19
  • Released Date: 2010-12-08
  • Deposition author(s): Wojdyla, J.A., Housden, N.G., Korczynska, J., Grishkovskaya, I., Kirkpatrick, N., Brzozowski, A.M., Kleanthous, C.

Revision History

  • Version 1_0: 2010-12-08

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance