2KSQ

The myristoylated yeast ARF1 in a GTP and bicelle bound conformation


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 280
  • Conformers Submitted: 20
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 2KSQ

Classification: TRANSPORT PROTEIN

Total Structure Weight: 22360.67

Macromolecule Entities
Molecule Chains Length Organism Details
ADP-ribosylation factor 1 A 181 Saccharomyces cerevisiae Mutation: T55C, K59C, R83C, R117C, S176C
Gene Name(s): ARF1 Gene View YDL192W D1244
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: ADP-Ribosylation Factors

Protein Name: ADP-ribosylation factor (ARF1), myristoylated


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GTP
Query on GTP

A GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MTN
Query on MTN

A S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro- 1H-pyrrol-3-yl)methyl] methanesulfonothioate
MTSL (Synonym)
C10 H18 N O3 S2
MXZPGYFBZHBAQM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MYR
Query on MYR
A NON-POLYMER C14 H28 O2 --

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 280
  • Conformers Submitted: 20
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-01-12
  • Released Date: 2010-07-07
  • Deposition author(s): Liu, Y., Kahn, R., Prestegard, J.

Revision History

  • Version 1_0: 2010-07-07

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2011-07-27

    Type: Non-polymer description