2ERV

Crystal structure of the outer membrane enzyme PagL


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 2ERV

Classification: MEMBRANE PROTEIN

Total Structure Weight: 36793.96

Macromolecule Entities
Molecule Chains Length Organism Details
hypothetical protein Paer03002360 A, B 150 Pseudomonas aeruginosa Gene Name(s): pagL PA4661
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Beta-Barrel Membrane Proteins: Monomeric/Dimeric

Protein Name: PagL LPS 3-O-deacylase


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CXE
Query on CXE

A, B PENTAETHYLENE GLYCOL MONODECYL ETHER
C20 H42 O6
QAXPOSPGRHYIHE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.198
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 92.26 α = 90.00
b = 48.99 β = 115.46
c = 105.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-10-25
  • Released Date: 2006-04-11
  • Deposition author(s): Rutten, L., Geurtsen, J., Lambert, W., Smolenaers, J.J., Bonvin, A.M., van der Ley, P., Egmond, M.R., Gros, P., Tommassen, J.

Revision History

  • Version 1_0: 2006-04-11

    Type: Initial release

  • Version 1_1: 2008-05-01

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Advisory, Version format compliance

  • Version 1_3: 2017-10-18

    Type: Advisory, Refinement description