5NK8

Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 2f


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.166

Literature

Macromolecules
Sequence Display for 5NK8

Classification: TRANSFERASE

Total Structure Weight: 35004.93

Macromolecule Entities
Molecule Chains Length Organism Details
Ephrin type-A receptor 2 A 306 Homo sapiens EC#: 2.7.10.1 IUBMB
Gene Name(s): EPHA2 Gene View ECK
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
90Z
Query on 90Z

A ~{N}-(2-chloranyl-6-methyl-phenyl)-2-[[3- [(2,2,6,6-tetramethyl-1-oxidanyl-piperidin- 4-yl)carbamoyl]phenyl]amino]-1,3-thiazole- 5-carboxamide
C27 H32 Cl N5 O3 S
NBHNLUWASSBGER-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.166
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 32.28 α = 90.00
b = 105.06 β = 94.31
c = 39.31 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-03-31
  • Released Date: 2017-06-07
  • Deposition author(s): KUDLINZKI, D., LINHARD, V.L., WITT, K., GANDE, S.L., SAXENA, K., HEINZLMEIR, S., MEDARD, G., KUESTER, B., SCHWALBE, H.

Revision History

  • Version 1_0: 2017-06-07

    Type: Initial release

  • Version 1_1: 2017-06-28

    Type: Database references