5LVS

Self-assembled protein-aromatic foldamer complexes with 2:3 and 2:2:1 stoichiometries


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.42 Å
  • R-Value Free: 0.178
  • R-Value Work: 0.149

Literature

Macromolecules
Sequence Display for 5LVS

Classification: LYASE

Total Structure Weight: 63411.69

Macromolecule Entities
Molecule Chains Length Organism Details
Carbonic anhydrase 2 A, B 259 Homo sapiens EC#: 4.2.1.1 IUBMB
Gene Name(s): CA2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 8 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
6H0
Query on 6H0

A, B ~{N}-[[3-(4-formamidobutoxy)phenyl]methyl]- 4-sulfamoyl-benzamide
C19 H23 N3 O5 S
ASGCSQAUBAMMLK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
QVE
Query on QVE

A, B 8-azanyl-4-(2-hydroxy-2-oxoethyloxy)quinoline- 2-carboxylic acid
C12 H10 N2 O5
ISBWTKCQKHNORE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
QUK
Query on QUK

A, B 8-azanyl-4-(3-azanylpropoxy)quinoline-2-carboxylic acid
C13 H15 N3 O3
QGMHWPPZJKLYHR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
QUJ
Query on QUJ

A, B 8-azanyl-4-(2-methylpropoxy)quinoline-2-carboxylic acid
C14 H16 N2 O3
UQMUZAYVJKDBFB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
QVS
Query on QVS

A, B 8-azanyl-4-oxidanyl-quinoline-2-carboxylic acid
C10 H8 N2 O3
KZBXAHDVCSOKJO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FOR
Query on FOR

A FORMYL GROUP
C H2 O
WSFSSNUMVMOOMR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.42 Å
  • R-Value Free: 0.178
  • R-Value Work: 0.149
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 158.73 α = 90.00
b = 54.81 β = 112.77
c = 84.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-09-14
  • Released Date: 2017-03-08
  • Deposition author(s): JEWGINSKI, M., LANGLOIS D'ESTAINTOT, B., GRANIER, T., HUC, Y.

Revision History

  • Version 1_0: 2017-03-08

    Type: Initial release

  • Version 1_1: 2017-03-15

    Type: Database references