5LLO

Crystal structure of human carbonic anhydrase isozyme XII with 3-[(1S)-2,3-Dihydro-1H-inden-1-ylamino]-2,5,6-trifluoro-4-[(2-hy-droxyethyl)sulfonyl]benzenesulfonamide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 5LLO

Classification: LYASE

Total Structure Weight: 121918.92

Macromolecule Entities
Molecule Chains Length Organism Details
Carbonic anhydrase 12 A, B, C, D 263 Homo sapiens EC#: 4.2.1.1 IUBMB
Fragment: human carbonic anhydrase XII
Gene Name(s): CA12 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
5EF
Query on 5EF

A, B, C, D 3-[(1S)-2,3-dihydro-1H-inden-1-ylamino]-2,5,6- trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide
C17 H17 F3 N2 O5 S2
WMOJSIMFSAOOLP-NSHDSACASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B, D 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.185
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 77.29 α = 90.00
b = 74.11 β = 108.95
c = 91.58 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-07-28
  • Released Date: 2017-08-16
  • Deposition author(s): Smirnov, A., Manakova, E., Grazulis, S.

Revision History

  • Version 1_0: 2017-08-16

    Type: Initial release