5IO1
CRYSTAL STRUCTURE OF RECOMBINANT HUMAN Z ALPHA-1-ANTITRYPSIN
- PDB DOI: https://doi.org/10.2210/pdb5IO1/pdb
- Classification: HYDROLASE INHIBITOR
- Organism(s): Homo sapiens
- Expression System: Drosophila melanogaster
- Mutation(s): Yes 
- Deposited: 2016-03-08 Released: 2016-06-08 
- Funding Organization(s): nsfc
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.34 Å
- R-Value Free: 0.275 
- R-Value Work: 0.215 
- R-Value Observed: 0.218 
This is version 1.3 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Alpha-1-antitrypsin | 398 | Homo sapiens | Mutation(s): 3  Gene Names: SERPINA1, AAT, PI, PRO0684, PRO2209 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01009 (Homo sapiens) Explore P01009  Go to UniProtKB:  P01009 | |||||
PHAROS:  P01009 GTEx:  ENSG00000197249  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01009 | ||||
Sequence AnnotationsExpand | |||||
|
Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | C [auth A], D [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.34 Å
- R-Value Free: 0.275 
- R-Value Work: 0.215 
- R-Value Observed: 0.218 
- Space Group: P 1 21 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 74.138 | α = 90 |
b = 53.675 | β = 96.88 |
c = 110.144 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
MOSFLM | data reduction |
SCALA | data scaling |
PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2016-06-08  Deposition Author(s): Zhou, A.
Funding Organization | Location | Grant Number |
---|---|---|
nsfc | China | 31370727,31170724,81572090 |
Revision History (Full details and data files)
- Version 1.0: 2016-06-08
Type: Initial release - Version 1.1: 2017-02-15
Changes: Database references - Version 1.2: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.3: 2023-11-08
Changes: Data collection, Database references, Refinement description, Structure summary