5ES2

The crystal structure of a functionally uncharacterized protein LPG0634 from Legionella pneumophila subsp. pneumophila str. Philadelphia 1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.191

Literature

Macromolecules
Sequence Display for 5ES2

Classification: Structural Genomics Unknown Function

Total Structure Weight: 101226.60

Macromolecule Entities
Molecule Chains Length Organism Details
Uncharacterized protein LPG0634 A, B 433 Legionella pneumophila Gene Name(s): lpg0634
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A, B ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.191
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 59.07 α = 90.00
b = 97.32 β = 96.08
c = 100.45 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-11-16
  • Released Date: 2015-12-16
  • Deposition author(s): Tan, K., Xu, X., Cui, H., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • Version 1_0: 2015-12-16

    Type: Initial release

  • Version 1_1: 2017-09-20

    Type: Author supporting evidence, Derived calculations