5E43

Crystal Structure of Beta-lactamase Sros_5706 from Streptosporangium roseum


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.71 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.159

Literature

Macromolecules
Sequence Display for 5E43

Classification: HYDROLASE

Total Structure Weight: 32831.91

Macromolecule Entities
Molecule Chains Length Organism Details
Beta-lactamase A 297 Streptosporangium roseum EC#: 3.5.2.6 IUBMB
Mutation: A-2S, S-1N
Gene Name(s): Sros_5706
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NO3
Query on NO3

A NITRATE ION
N O3
NHNBFGGVMKEFGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.71 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.159
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 74.85 α = 90.00
b = 92.93 β = 90.00
c = 85.63 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-10-05
  • Released Date: 2015-10-14
  • Deposition author(s): Kim, Y., Hatzos-Skintges, C., Endres, M., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • Version 1_0: 2015-10-14

    Type: Initial release

  • Version 1_1: 2017-09-06

    Type: Author supporting evidence, Derived calculations