5BMO

LnmX protein, a putative GlcNAc-PI de-N-acetylase from Streptomyces atroolivaceus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.92 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.168

Literature

Macromolecules
Sequence Display for 5BMO

Classification: HYDROLASE

Total Structure Weight: 80312.31

Macromolecule Entities
Molecule Chains Length Organism Details
Putative uncharacterized protein LnmX A, B, C 246 Streptomyces atroolivaceus Gene Name(s): LnmX
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

A, B, C ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A, B, C POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.92 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.168
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 72.00 α = 90.00
b = 72.00 β = 90.00
c = 284.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-05-22
  • Released Date: 2015-06-10
  • Deposition author(s): Osipiuk, J., Hatzos-Skintges, C., Cuff, M., Endres, M., Babnigg, G., Lohman, J., Ma, M., Rudolf, J., Chang, C.-Y., Shen, B., Joachimiak, A., Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)

Revision History

  • Version 1_0: 2015-06-10

    Type: Initial release

  • Version 1_1: 2017-09-27

    Type: Author supporting evidence, Derived calculations, Source and taxonomy, Structure summary