4RPV

co-crystal structure of Pim1 with compound 3


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.05 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 4RPV

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 46714.64

Macromolecule Entities
Molecule Chains Length Organism Details
Serine/threonine-protein kinase pim-1 A 410 Homo sapiens EC#: 2.7.11.1 IUBMB
Gene Name(s): PIM1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3UR
Query on 3UR

A (3S)-1-{6-[5-(2,6-difluorophenyl)-2H-indazol- 3-yl]pyrazin-2-yl}piperidin-3-amine
C22 H20 F2 N6
HWIDISMNBLRQNP-AWEZNQCLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.05 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.229
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 100.09 α = 90.00
b = 100.09 β = 90.00
c = 81.21 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-10-31
  • Released Date: 2015-02-04
  • Deposition author(s): Huang, X.

Revision History

  • 2015-02-18
    Type: Database references