4W8I

Crystal structure of LpSPL/Lpp2128, Legionella pneumophila sphingosine-1 phosphate lyase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.316
  • R-Value Work: 0.262

Literature

Macromolecules
Sequence Display for 4W8I

Classification: LYASE

Total Structure Weight: 121674.86

Macromolecule Entities
Molecule Chains Length Organism Details
Probable sphingosine-1-phosphate lyase A, B 551 Legionella pneumophila EC#: 4.1.2.27 IUBMB
Gene Name(s): lpp2128
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 57.78 α = 90.00
b = 118.25 β = 114.38
c = 57.79 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-08-24
  • Released Date: 2014-11-05
  • Deposition author(s): Stogios, P.J., Daniels, C., Skarina, T., Cuff, M., Di Leo, R., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • Version 1_0: 2014-11-05

    Type: Initial release

  • Version 1_1: 2016-02-03

    Type: Database references

  • Version 1_2: 2016-02-17

    Type: Data collection

  • Version 1_3: 2016-03-02

    Type: Database references