4P3F

Structure of the human SRP68-RBD


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.176

Literature

Macromolecules
Sequence Display for 4P3F

Classification: RNA BINDING PROTEIN

Total Structure Weight: 51775.09

Macromolecule Entities
Molecule Chains Length Organism Details
Signal recognition particle subunit SRP68 A, B 216 Homo sapiens Fragment: UNP residues 47-254
Mutation: E108D
Gene Name(s): SRP68 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PEG
Query on PEG

A DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.176
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 37.81 α = 90.00
b = 93.31 β = 109.34
c = 60.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-03-07
  • Released Date: 2014-04-16
  • Deposition author(s): Grotwinkel, J.T., Wild, K., Sinning, I.

Revision History

No revisions since initial release