4GZE

Crystal structure of 6-phospho-beta-glucosidase from Lactobacillus plantarum (apo form)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.31 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.174

Literature

Macromolecules
Sequence Display for 4GZE

Classification: HYDROLASE

Total Structure Weight: 335137.19

Macromolecule Entities
Molecule Chains Length Organism Details
6-phospho-beta-glucosidase A, B, C..., D, E, FA, B, C, D, E, F 481 Lactobacillus plantarum EC#: 3.2.1.86 IUBMB
Gene Name(s): pbg1 lp_0440
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

D GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B, D CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D, E, F L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 96.09 α = 90.00
b = 96.09 β = 90.00
c = 289.14 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-06
  • Released Date: 2012-09-26
  • Deposition author(s): Michalska, K., Hatzos-Skintges, C., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • Version 1_0: 2012-09-26

    Type: Initial release

  • Version 1_1: 2013-02-27

    Type: Database references

  • Version 1_2: 2014-01-15

    Type: Database references