4F79

The crystal structure of 6-phospho-beta-glucosidase mutant (E375Q) in complex with Salicin 6-phosphate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.54 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.180

Literature

Macromolecules
Sequence Display for 4F79

Classification: HYDROLASE

Total Structure Weight: 56024.80

Macromolecule Entities
Molecule Chains Length Organism Details
Putative phospho-beta-glucosidase A 480 Streptococcus mutans EC#: 3.2.1.86 IUBMB
Mutation: E375Q
Gene Name(s): bgl SMU_1601
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
P53
Query on P53

A 2-(hydroxymethyl)phenyl 6-O-phosphono-beta- D-glucopyranoside
Salicin-6-phosphate (Synonym)
C13 H19 O10 P
FSJKOMDYZYBBLV-UJPOAAIJSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.54 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.180
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 82.28 α = 90.00
b = 82.28 β = 90.00
c = 221.21 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-15
  • Released Date: 2012-06-13
  • Deposition author(s): Tan, K., Michalska, K., Li, H., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • Version 1_0: 2012-06-13

    Type: Initial release