4BEU

Structure of Vibrio cholerae broad spectrum racemase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.173
  • R-Value Work: 0.163

Literature

Macromolecules
Sequence Display for 4BEU

Classification: TRANSFERASE

Total Structure Weight: 42923.74

Macromolecule Entities
Molecule Chains Length Organism Details
ALANINE RACEMASE A 392 Vibrio cholerae EC#: 5.1.1.1 IUBMB
Gene Name(s): alr2 VC_1312
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLP
Query on PLP

A PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate (Synonym)
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.173
  • R-Value Work: 0.163
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 96.62 α = 90.00
b = 51.09 β = 101.15
c = 76.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-03-12
  • Released Date: 2014-01-15
  • Deposition author(s): Carrasco-Lopez, C., Hermoso, J.A.

Revision History

  • Version 1_0: 2014-01-15

    Type: Initial release

  • Version 1_1: 2014-01-22

    Type: Database references

  • Version 1_2: 2014-07-09

    Type: Database references