3TIZ

CDK2 in complex with NSC 111848


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.02 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 3TIZ

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 34736.32

Macromolecule Entities
Molecule Chains Length Organism Details
Cyclin-dependent kinase 2 A 298 Homo sapiens EC#: 2.7.11.22 IUBMB
Gene Name(s): CDK2 Gene View CDKN2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3TI
Query on 3TI

A 1-{(E)-[(4-hydroxyphenyl)imino]methyl}naphthalen- 2-ol
C17 H13 N O2
KPLUVIWNJYXFQT-WOJGMQOQSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
3TI IC50: >1.50e+5 nM (100) BindingDB

N/A in BindingMoad
IC50: 150000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.02 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.192
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 53.20 α = 90.00
b = 71.88 β = 90.00
c = 72.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-08-22
  • Released Date: 2012-08-22
  • Deposition author(s): Alam, R., Schonbrunn, E.

Revision History

  • Version 1_0: 2012-08-22

    Type: Initial release

  • Version 1_1: 2012-08-29

    Type: Database references

  • Version 1_2: 2012-10-10

    Type: Database references