3NEW

p38-alpha complexed with Compound 10


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free: 0.306
  • R-Value Work: 0.214

Literature

Macromolecules
Sequence Display for 3NEW

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 42330.09

Macromolecule Entities
Molecule Chains Length Organism Details
Mitogen-activated protein kinase 14 A 366 Homo sapiens EC#: 2.7.11.24 IUBMB
Mutation: C162S
Gene Name(s): MAPK14 Gene View CSBP CSBP1 CSBP2 CSPB1 MXI2 SAPK2A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3NE
Query on 3NE

A 4-(trifluoromethyl)-3-[3-(trifluoromethyl)phenyl]- 1,7-dihydro-6H-pyrazolo[3,4-b]pyridin-6-one
C14 H7 F6 N3 O
YEINPIKXEQEWSU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
3NE N/A in BindingDB
N/A in BindingMoad
Kd: 10000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free: 0.306
  • R-Value Work: 0.214
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 64.91 α = 90.00
b = 74.48 β = 90.00
c = 77.89 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-06-09
  • Released Date: 2010-12-01
  • Deposition author(s): Goedken, E.R., Comess, K.M., Sun, C., Argiriadi, M., Jia, Y., Quinn, C.M., Banach, D.L., Marcotte, D., Borhani, D.

Revision History

  • 2011-07-13
    Type: Version format compliance