3J3V

Atomic model of the immature 50S subunit from Bacillus subtilis (state I-a)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 13.3 Å
  • Aggregation State: Particle
  • Reconstruction Method: Single Particle

Literature

Macromolecules
Sequence Display for 3J3V

Classification: RIBOSOME

Total Structure Weight: 1314096.25


Macromolecule Entities
Molecule Chains Length Organism Details
50S ribosomal protein L32 0 59 Bacillus subtilis Gene Name(s): rpmF BSU15080
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L34 2 44 Bacillus subtilis Gene Name(s): rpmH BSU41060
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L1 5 232 Bacillus subtilis Gene Name(s): rplA BSU01030
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L11 6 141 Bacillus subtilis Gene Name(s): rplK relC tsp6 BSU01020
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L2 C 277 Bacillus subtilis Gene Name(s): rplB BSU01190
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L3 D 209 Bacillus subtilis Gene Name(s): rplC BSU01160
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L4 E 207 Bacillus subtilis Gene Name(s): rplD BSU01170
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L5 F 179 Bacillus subtilis Gene Name(s): rplE BSU01280
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L6 G 179 Bacillus subtilis Gene Name(s): rplF BSU01310
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L13 J 145 Bacillus subtilis Gene Name(s): rplM BSU01490
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L14 K 122 Bacillus subtilis Gene Name(s): rplN BSU01260
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L15 L 146 Bacillus subtilis Gene Name(s): rplO BSU01350
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L17 N 120 Bacillus subtilis Gene Name(s): rplQ BSU01440
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L18 O 120 Bacillus subtilis Gene Name(s): rplR BSU01320
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L19 P 115 Bacillus subtilis Gene Name(s): rplS BSU16040
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L20 Q 119 Bacillus subtilis Gene Name(s): rplT BSU28850
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L21 R 102 Bacillus subtilis Gene Name(s): rplU BSU27960
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L22 S 113 Bacillus subtilis Gene Name(s): rplV BSU01210
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L23 T 95 Bacillus subtilis Gene Name(s): rplW BSU01180
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L24 U 103 Bacillus subtilis Gene Name(s): rplX BSU01270
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L29 X 66 Bacillus subtilis Gene Name(s): rpmC BSU01240
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S ribosomal protein L30 Y 59 Bacillus subtilis Gene Name(s): rpmD BSU01340
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
ribosome RNA 23S A 2927 Bacillus subtilis
ribosome RNA 5S B 119 Bacillus subtilis


Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 13.3 Å
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-04-28
  • Released Date: 2013-06-12
  • Deposition author(s): Li, N., Guo, Q., Zhang, Y., Yuan, Y., Ma, C., Lei, J., Gao, N.

Revision History

  • Version 1_0: 2013-06-12

    Type: Initial release

  • Version 1_1: 2013-08-28

    Type: Database references