2BZ6

Orally available Factor7a inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.166

Literature

Macromolecules
Sequence Display for 2BZ6

Classification: HYDROLASE

Total Structure Weight: 34401.28

Macromolecule Entities
Molecule Chains Length Organism Details
BLOOD COAGULATION FACTOR VIIA H 254 Homo sapiens EC#: 3.4.21.21 IUBMB
Fragment: FACTOR VII HEAVY CHAIN, RESIDUES 213-466
Gene Name(s): F7 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
BLOOD COAGULATION FACTOR VIIA L 53 Homo sapiens EC#: 3.4.21.21 IUBMB
Fragment: FACTOR VII LIGHT CHAIN, RESIDUES 150-202
Gene Name(s): F7 Gene View

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
346
Query on 346

H (R)-(4-CARBAMIMIDOYL-PHENYLAMINO)-[5-ETHOXY- 2-FLUORO-3-[(R)-TETRAHYDRO-FURAN-3-YLOXY]- PHENYL]-ACETIC ACID
(2R)-({4-[AMINO(IMINO)METHYL]PHENYL}AMINO){5- ETHOXY-2-FLUORO-3-[(3R)-TETRAHYDROFURAN-3- YLOXY]PHENYL}ACETIC ACID (Synonym)
C21 H24 F N3 O5
PGYOHIAQCFZQDK-AUUYWEPGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

H SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

H CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
346 Ki: 81 nM (100) BindingDB

Ki: 81 nM  BindingMOAD
Ki: 81 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.166
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 94.93 α = 90.00
b = 94.93 β = 90.00
c = 115.64 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-11
  • Released Date: 2006-02-22
  • Deposition author(s): Groebke-Zbinden, K., Obst-Sander, U., Hilpert, K., Kuehne, H., Banner, D.W., Boehm, H.J., Stahl, M., Ackermann, J., Alig, L., Weber, L., Wessel, H.P., Riederer, M.A., Tschopp, T.B., Lave, T.

Revision History

  • 2011-07-13
    Type: Advisory, Version format compliance