2DT4

Crystal structure of Pyrococcus horikoshii a plant- and prokaryote-conserved (PPC) protein at 1.60 resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.164

Literature

Macromolecules
Sequence Display for 2DT4

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 16205.84

Macromolecule Entities
Molecule Chains Length Organism Details
Hypothetical protein PH0802 A 143 Pyrococcus horikoshii Gene Name(s): PH0802
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.164
  • Space Group: P 63 2 2

Unit Cell:

Length (Å) Angle (°)
a = 53.92 α = 90.00
b = 53.92 β = 90.00
c = 159.18 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-07-10
  • Released Date: 2007-05-22
  • Deposition author(s): Lin, L., Nakano, H., Uchiyama, S., Fujimoto, S., Matsunaga, S., Nakamura, S.

Revision History

  • 2008-04-30
    Type: Version format compliance
  • 2011-07-13
    Type: Derived calculations, Version format compliance