1SHZ

Crystal Structure of the p115RhoGEF rgRGS Domain in A Complex with Galpha(13):Galpha(i1) Chimera


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 1SHZ

Classification: SIGNALING PROTEIN

Total Structure Weight: 133115.11

Macromolecule Entities
Molecule Chains Length Organism Details
Guanine Nucleotide-Binding Protein Galpha(13):Galpha(i1) Chimera A, D 340 Mus musculus Rattus norvegicus Fragment: residues 21-47, 185-210, 213-230, 240-353 of Galpha(i1) and residues 64-207, 234-235, 254-262 of Galpha(13)
Gene Name(s): Gnai1 Gnai-1 Gna13 Gna-13
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Rho guanine nucleotide exchange factor 1 C, F 233 Homo sapiens Fragment: N-terminal RhoGEF RGS (rgRGS) domain of p115RhoGEF (residues 7-239)
Gene Name(s): ARHGEF1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A, D GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ALF
Query on ALF

A, D TETRAFLUOROALUMINATE ION
Al F4
UYOMQIYKOOHAMK-UHFFFAOYSA-J
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.229
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 199.75 α = 90.00
b = 105.27 β = 96.91
c = 71.75 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-02-26
  • Released Date: 2005-01-18
  • Deposition author(s): Chen, Z., Singer, W.D., Sternweis, P.C., Sprang, S.R.

Revision History

  • Version 1_0: 2005-01-18

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-08-02

    Type: Source and taxonomy