1ZTL

Crystal Structure of the Catalytic Domain of Coagulation Factor XI in Complex with N-[4-Guanidino-1-(thiazole-2-carbonyl)-butyl]-2-{6-oxo-5-[(quinolin-8-ylmethyl)-amino]-2-m-tolyl-6H-pyrimidin-1-yl}-acetamide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1ZTL

Classification: HYDROLASE

Total Structure Weight: 27568.22

Macromolecule Entities
Molecule Chains Length Organism Details
Coagulation factor XI A 238 Homo sapiens EC#: 3.4.21.27 IUBMB
Fragment: Catalytic Domain
Mutation: S75A, K78A, T115A, C123S
Gene Name(s): F11 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
737
Query on 737

A N-[4-GUANIDINO-1-(THIAZOLE-2-CARBONYL)-BUTYL]- 2-{6-OXO-5-[(QUINOLIN-8-YLMETHYL)-AMINO]- 2-M-TOLYL-6H-PYRIMIDIN-1-YL}-ACETAMIDE
C32 H33 N9 O3 S
BWWLNFRQHXSLCW-DEOSSOPVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.208
  • Space Group: I 2 3

Unit Cell:

Length (Å) Angle (°)
a = 121.96 α = 90.00
b = 121.96 β = 90.00
c = 121.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-05-27
  • Released Date: 2006-05-09
  • Deposition author(s): Nagafuji, P., Jin, L., Rynkiewicz, M., Quinn, J., Bibbins, F., Meyers, H., Babine, R., Strickler, J.E., Abdel-Meguid, S.S.

Revision History

  • 2008-04-30
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance