6EX4

Staphylococcus aureus cambialistic superoxide dismutase SodM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.174 
  • R-Value Observed: 0.176 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

An evolutionary path to altered cofactor specificity in a metalloenzyme

Barwinska-Sendra, A.Garcia, Y.M.Sendra, K.Basle, A.Mackenzie, E.S.Tarrant, E.Card, P.Tabares, L.C.Bicep, C.Un, S.Kehl-Fie, T.E.Waldron, K.J.

(2020) Nat Commun 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Superoxide dismutase
A, B
199Staphylococcus aureusMutation(s): 0 
Gene Names: sodAsodMBER48_000119BN1321_40056CEJ93_07215ERS072738_00830ERS072840_00559ERS073583_02338ERS074020_00889HMPREF3211_00238
EC: 1.15.1.1
UniProt
Find proteins for Q2G261 (Staphylococcus aureus (strain NCTC 8325 / PS 47))
Explore Q2G261 
Go to UniProtKB:  Q2G261
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ2G261
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.174 
  • R-Value Observed: 0.176 
  • Space Group: P 61
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 141.954α = 90
b = 141.954β = 90
c = 46.159γ = 120
Software Package:
Software NamePurpose
GDAdata collection
XDSdata reduction
Aimlessdata scaling
MOLREPphasing
Cootmodel building
REFMACrefinement

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research CouncilUnited Kingdom--
Wellcome TrustUnited Kingdom098375/Z/12/Z

Revision History  (Full details and data files)

  • Version 1.0: 2018-11-21
    Type: Initial release
  • Version 1.1: 2020-06-10
    Changes: Database references
  • Version 1.2: 2024-01-17
    Changes: Data collection, Database references, Derived calculations, Refinement description