2GK0

Structure of Catalytic Elimination Antibody 13G5 from a twinned crystal in space group C2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.255 
  • R-Value Work: 0.191 
  • R-Value Observed: 0.236 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Bifunctional Catalysis of Proton Transfer at an Antibody Active Site.

Muller, R.Debler, E.W.Steinmann, M.Seebeck, F.P.Wilson, I.A.Hilvert, D.

(2007) J Am Chem Soc 129: 460-461


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Catalytic elimination antibody 13G5 light chainA [auth L],
C [auth A]
217Mus musculusMutation(s): 0 
UniProt
Find proteins for Q65ZC0 (Mus musculus)
Explore Q65ZC0 
Go to UniProtKB:  Q65ZC0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ65ZC0
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Catalytic elimination antibody 13G5 heavy chainB [auth H],
D [auth B]
221Mus musculusMutation(s): 0 
UniProt
Find proteins for Q91Z05 (Mus musculus)
Explore Q91Z05 
Go to UniProtKB:  Q91Z05
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ91Z05
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.255 
  • R-Value Work: 0.191 
  • R-Value Observed: 0.236 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 67.875α = 90
b = 84.619β = 90.03
c = 150.074γ = 90
Software Package:
Software NamePurpose
ADSCdata collection
DENZOdata reduction
AMoREphasing
SHELXL-97refinement
SCALEPACKdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2007-02-06
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2023-08-30
    Changes: Data collection, Database references, Refinement description