2GJW

RNA Recognition and Cleavage by an Splicing Endonuclease


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.247

Literature

Macromolecules
Sequence Display for 2GJW

Classification: Hydrolase / RNA

Total Structure Weight: 172840.45


Macromolecule Entities
Molecule Chains Length Organism Details
tRNA-splicing endonuclease A, B, C, D 313 Archaeoglobus fulgidus EC#: 4.6.1.16 IUBMB
Mutation: I155V
Gene Name(s): endA AF_0900
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*GP*CP*GP*AP*CP*CP*GP*AP*CP*CP*AP*(DU)P*AP*GP*CP*UP*GP*CP*A)-3' E, I 19 synthetic
5'-R(*UP*GP*CP*AP*GP*CP*GP*GP*UP*CP*AP*(A23))-3' F, J 12 synthetic
5'-R(*AP*GP*GP*UP*CP*GP*C)-3' H, L 7 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
A23
Query on A23
F, J RNA LINKING C10 H13 N5 O9 P2 A

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.247
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 89.96 α = 90.00
b = 140.41 β = 111.68
c = 82.05 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-03-31
  • Released Date: 2006-09-12
  • Deposition author(s): Xue, S., Calvin, K., Li, H.

Revision History

  • 2008-05-01
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance