2AKI

Normal mode-based flexible fitted coordinates of a translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 14.9 Å
  • Aggregation State: Particle
  • Reconstruction Method: Single Particle

Literature

Macromolecules
Sequence Display for 2AKI

Classification: PROTEIN TRANSPORT

Total Structure Weight: 127926.19

Macromolecule Entities
Molecule Chains Length Organism Details
Protein-export membrane protein secG A, X 77 Escherichia coli Gene Name(s): secG b3175 JW3142
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Preprotein translocase secY subunit B, Y 400 Escherichia coli Fragment: plug TMH 2a omitted
Gene Name(s): secY prlA b3300 JW3262
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Preprotein translocase secE subunit C, Z 111 Escherichia coli Gene Name(s): secE prlG b3981 JW3944
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 14.9 Å
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-03
  • Released Date: 2005-11-15
  • Deposition author(s): Mitra, K., Schaffitzel, C., Shaikh, T., Tama, F., Jenni, S., Brooks III, C.L., Ban, N., Frank, J.

Revision History

  • 2008-04-30
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance