Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr7 : 130,020,426


CPA1 - 7q32.2

carboxypeptidase A1

Locus: 7q32.2Orientation: +
View position on Gene View: CPA1
Position in mRNA: 65 (phase: 1)
View position 22 on canonical UniProt sequence: P15085 Residue: G
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 4UF4 A 22 1 (canonical sequence)
Mapping to Pathway Maps for P15085
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547