Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr5 : 912,111


TRIP13 - 5p15.33

thyroid hormone receptor interactor 13

Locus: 5p15.33Orientation: +
View position on Gene View: TRIP13
Position in mRNA: 1020 (phase: 2)
View position 340 on canonical UniProt sequence: Q15645 Residue: K
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 5WC2 A 340 1 (canonical sequence)
Mapping to Pathway Maps for Q15645
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547