Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr4 : 25,398,470


ANAPC4 - 4p15.2

anaphase promoting complex subunit 4

Locus: 4p15.2Orientation: +
View position on Gene View: ANAPC4
Position in mRNA: 1163 (phase: 1)
UniProt mapping via isoform 3 (position on isoform:388)
View position 388 on canonical UniProt sequence: Q9UJX5 Residue: E
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 5BPW A 388 3
Mapping to Pathway Maps for Q9UJX5
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547