Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr22 : 30,864,683


SEC14L3 - 22q12.2

SEC14 like lipid binding 3

Locus: 22q12.2Orientation: -
View position on Gene View: SEC14L3
Position in mRNA: 4 (phase: 0)
UniProt mapping via isoform 3 (position on isoform:2)
View position 79 on canonical UniProt sequence: Q9UDX4 Residue: V
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 4UYB A 79 3
Mapping to Pathway Maps for Q9UDX4
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547