Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr15 : 75,219,107


COX5A - 15q24.2

cytochrome c oxidase subunit 5A

Locus: 15q24.2Orientation: -
View position on Gene View: COX5A
Position in mRNA: 339 (phase: 2)
View position 113 on canonical UniProt sequence: P20674 Residue: K
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 5Z62 E 113 1 (canonical sequence)
Mapping to Pathway Maps for P20674
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547