Map Genomic Position to Protein Sequence and 3D Structure


This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).

Chromosome chr11 : 62,592,589

STX5 - 11q12.3

syntaxin 5

Locus: 11q12.3Orientation: -
View position on Gene View: STX5
Position in mRNA: 598 (phase: 0)
UniProt mapping via isoform 4 (position on isoform:200)
View position 200 on canonical UniProt sequence: Q13190 Residue: N
Mapping to Pathway Maps for Q13190
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547