PRD_001094

CD4-MIMETIC MINIPROTEIN M48U1

PRD_001094 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 4JZW.

PRD_001094, as a polymer entry, exists in 9 entries. Examples include: 4JZW 4JZZ 4LAJ


Chemical Component Summary

NameCD4-MIMETIC MINIPROTEIN M48U1
Identifiersn/a
FormulaC133 H216 N38 O32 S6
Molecular Weight3,051.76
TypePeptide-like
Isomeric SMILESCC(C)C[C@@H]1NC(=O)[C@H](CO)NC(=O)[C@H](CCCC[NH3+])NC(=O)[C@@H]2CSSC[C@H](NC(=O)[C@H](C)NC(=O)[C@@H]3CSSC[C@H](NC(=O)[C@H](Cc4ccccc4)NC(=O)[C@H](Cc5c[nH]c[nH+]5)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(N)=O)NC(=O)CCSSC[C@H](NC(=O)[C@H](CCCNC(N)=[NH2+])NC(=O)CNC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)CNC1=O)C(=O)N[C@@H](C)C(=O)N6CCC[C@@H]6C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](Cc7ccc(OCC8CCCCC8)cc7)C(=O)N3)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCNC(N)=[NH2+])C(=O)N2)C(=O)N[C@@H](C(C)C)C(N)=O
InChIInChI=1S/C133H212N38O32S6/c1-67(2)47-85-110(181)145-57-104(177)150-81(32-24-43-143-132(138)139)112(183)165-95-61-205-204-46-41-103(176)151-93(55-102(136)175)122(193)159-89(51-71(9)10)118(189)161-92(54-79-56-142-66-147-79)121(192)160-90(52-76-27-18-16-19-28-76)119(190)168-98-64-208-206-62-96(167-120(191)91(53-77-35-37-80(38-36-77)203-60-78-29-20-17-21-30-78)162-130(201)107(75(15)173)170-129(200)100-34-26-45-171(100)131(202)74(14)149-125(95)196)124(195)148-73(13)109(180)164-99(128(199)169-106(72(11)12)108(137)179)65-209-207-63-97(166-114(185)83(33-25-44-144-133(140)141)153-117(188)88(50-70(7)8)158-115(186)84(155-127(98)198)39-40-101(135)174)126(197)154-82(31-22-23-42-134)113(184)163-94(59-172)123(194)157-86(48-68(3)4)111(182)146-58-105(178)152-87(49-69(5)6)116(187)156-85/h16,18-19,27-28,35-38,56,66-75,78,81-100,106-107,172-173H,17,20-26,29-34,39-55,57-65,134H2,1-15H3,(H2,135,174)(H2,136,175)(H2,137,179)(H,142,147)(H,145,181)(H,146,182)(H,148,195)(H,149,196)(H,150,177)(H,151,176)(H,152,178)(H,153,188)(H,154,197)(H,155,198)(H,156,187)(H,157,194)(H,158,186)(H,159,193)(H,160,192)(H,161,189)(H,162,201)(H,163,184)(H,164,180)(H,165,183)(H,166,185)(H,167,191)(H,168,190)(H,169,199)(H,170,200)(H4,138,139,143)(H4,140,141,144)/p+4/t73-,74-,75+,81-,82-,83-,84-,85-,86-,87-,88-,89-,90-,91-,92-,93-,94-,95-,96-,97-,98-,99-,100+,106-,107-/m0/s1
InChIKeyZVTLAYDSFBBRPP-FUSAOVSLSA-R
CompositionPolymer Sequences: MPT,ASN,LEU,HIS,PHE,CYS,GLN,LEU,ARG,CYS,LYS,SER,LEU,GLY,LEU,LEU,GLY,ARG,CYS,ALA,DPR,THR,U2X,CYS,ALA,CYS,VAL,NH2
Non-Polymer Components: n/a
BIRD classINHIBITOR
Represented AsPOLYMER
Compound DetailsTHE CD4-MIMETIC MINIPROTEINS INHIBIT HIV-1 ENTRY AND ARE DERIVED FROM SCYLLATOXIN (A SCORPION TOXIN) BY TRANSPLANTING THE GP120-INTERACTIVE REGION OF CD4 ONTO THE SCYLLATOXIN SCAFFOLD, FOLLOWED BY MANY ROUNDS OF ITERATIVE OPTIMIZATION
Descriptionn/a

Chemical Details

Formal Charge0
Atom Count425
Chiral Atom Count25
Chiral AtomsC100, C102, C105, C120, C123, C126, C129, C14, C20, C29, C32, C37, C4, C43, C49, C52, C58, C61, C69, C75, C8, C83, C89, C92, C95
Bond Count432
Aromatic Bond Count17
Leaving Atomsn/a