6Y6X

Tetracenomycin X bound to the human ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth LB]SCOP2B SuperfamilyTranslational proteins8078351 3000811 SCOP2B (2022-06-29)
F [auth LC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052831 3002143 SCOP2B (2022-06-29)
F [auth LC]SCOP2B SuperfamilyRibosomal protein L48052832 3001146 SCOP2B (2022-06-29)
G [auth LD]SCOP2B SuperfamilyTranslational machinery components8052887 3000571 SCOP2B (2022-06-29)
H [auth LE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053100 3000334 SCOP2B (2022-06-29)
H [auth LE]SCOP2B SuperfamilyRibosomal protein L6e N-terminal domain8053099 3002160 SCOP2B (2022-06-29)
I [auth LF]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052922 3002152 SCOP2B (2022-06-29)
I [auth LF]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052923 3001378 SCOP2B (2022-06-29)
K [auth LH]SCOP2B SuperfamilyRibosomal protein L68033688 3000724 SCOP2B (2022-06-29)
L [auth LI]SCOP2B SuperfamilyRibosomal protein L16p/L10e8100400 3000884 SCOP2B (2022-06-29)
M [auth LJ]SCOP2B SuperfamilyRL5-like8073892 3001709 SCOP2B (2022-06-29)
N [auth LL]SCOP2B SuperfamilyRibosomal protein L13e-like8053155 3002162 SCOP2B (2022-06-29)
P [auth LN]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8098812 3000210 SCOP2B (2022-06-29)
R [auth LP]SCOP2B SuperfamilyRibosomal protein L228076704 3001078 SCOP2B (2022-06-29)
S [auth LQ]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095977 3001045 SCOP2B (2022-06-29)
W [auth LU]SCOP2B Superfamily60S Ribosomal protein L22e8053060 3002158 SCOP2B (2022-06-29)
X [auth LV]SCOP2B Superfamily50S Ribosomal protein L14-like8072050 3000433 SCOP2B (2022-06-29)
Z [auth LX]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095967 3000210 SCOP2B (2022-06-29)
AA [auth LY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076756 3000334 SCOP2B (2022-06-29)
BA [auth LZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053050 3000334 SCOP2B (2022-06-29)
CA [auth La]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077123 3001045 SCOP2B (2022-06-29)
DA [auth Lb]SCOP2B SuperfamilyRibosomal protein L29e8053036 3002157 SCOP2B (2022-06-29)
EA [auth Lc]SCOP2B SuperfamilyL30e-like8077491 3001739 SCOP2B (2022-06-29)
HA [auth Lf]SCOP2B SuperfamilyTranslational proteins8087455 3000811 SCOP2B (2022-06-29)
IA [auth Lg]SCOP2B SuperfamilyRibosomal protein L34e-like8053540 3002203 SCOP2B (2022-06-29)
KA [auth Li]SCOP2B SuperfamilyRibosomal protein L36e8053120 3002161 SCOP2B (2022-06-29)
MA [auth Lk]SCOP2B SuperfamilyRibosomal L38e protein-like8053567 3002206 SCOP2B (2022-06-29)
NA [auth Ll]SCOP2B SuperfamilyRibosomal protein L39e8095603 3001756 SCOP2B (2022-06-29)
RA [auth Lp]SCOP2B SuperfamilyZn-binding ribosomal proteins8101551 3001320 SCOP2B (2022-06-29)
TA [auth Lz]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like8098870 3001911 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth LA]PF00181e6y6xLA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
D [auth LA]PF03947e6y6xLA1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
E [auth LB]PF00297e6y6xLB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
F [auth LC]PF00573e6y6xLC2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
F [auth LC]PF14374e6y6xLC1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
G [auth LD]PF14204,PF17144e6y6xLD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
H [auth LE]PF01159,PF03868e6y6xLE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
I [auth LF]PF00327,PF08079e6y6xLF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
J [auth LG]PF01248e6y6xLG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
K [auth LH]PF00347e6y6xLH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
L [auth LI]PF00252e6y6xLI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
M [auth LJ]PF00281,PF00673e6y6xLJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
N [auth LL]PF01294e6y6xLL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
O [auth LM]PF00467,PF01929e6y6xLM1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
P [auth LN]PF00827e6y6xLN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
Q [auth LO]PF00572e6y6xLO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
R [auth LP]PF00237e6y6xLP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
S [auth LQ]PF17135e6y6xLQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
T [auth LR]PF01280e6y6xLR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
T [auth LR]PF01280e6y6xLR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
U [auth LS]F_UNCLASSIFIEDe6y6xLS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
U [auth LS]PF01775e6y6xLS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
V [auth LT]PF01157e6y6xLT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
W [auth LU]PF01776e6y6xLU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
X [auth LV]PF00238e6y6xLV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
Y [auth LW]PF01246e6y6xLW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
Z [auth LX]PF00276,PF03939e6y6xLX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
AA [auth LY]PF16906e6y6xLY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
BA [auth LZ]PF00467,PF01777e6y6xLZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
CA [auth La]PF00828e6y6xLa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
DA [auth Lb]PF01779e6y6xLb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
EA [auth Lc]PF01248e6y6xLc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
FA [auth Ld]PF01198e6y6xLd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
GA [auth Le]PF01655e6y6xLe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
HA [auth Lf]PF01247e6y6xLf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
IA [auth Lg]PF01199e6y6xLg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
JA [auth Lh]PF00831e6y6xLh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
KA [auth Li]PF01158e6y6xLi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
LA [auth Lj]PF01907e6y6xLj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
MA [auth Lk]PF01781e6y6xLk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
NA [auth Ll]PF00832e6y6xLl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
OA [auth Lm]PF01020e6y6xLm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
PA [auth Ln]PF05162e6y6xLn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
QA [auth Lo]PF00935e6y6xLo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
RA [auth Lp]PF01780e6y6xLp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
SA [auth Lr]PF01778e6y6xLr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
TA [auth Lz]PF00687e6y6xLz1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
TA [auth Lz]PF00687e6y6xLz2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: PF00687ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth LA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
D [auth LA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
E [auth LB]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
F [auth LC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
F [auth LC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
G [auth LD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
G [auth LD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
H [auth LE]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
H [auth LE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
I [auth LF]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
I [auth LF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
J [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth LH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
L [auth LI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth LJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
M [auth LJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
N [auth LL]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
O [auth LM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
P [auth LN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
Q [auth LO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
R [auth LP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
S [auth LQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
T [auth LR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
U [auth LS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
V [auth LT]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
W [auth LU]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
X [auth LV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Y [auth LW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
Z [auth LX]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
Z [auth LX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
AA [auth LY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
AA [auth LY]PF00467KOW motif (KOW)KOW motif- Family
BA [auth LZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
BA [auth LZ]PF00467KOW motif (KOW)KOW motif- Family
CA [auth La]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
DA [auth Lb]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
EA [auth Lc]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
FA [auth Ld]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
GA [auth Le]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
HA [auth Lf]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
IA [auth Lg]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
JA [auth Lh]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
KA [auth Li]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
LA [auth Lj]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
MA [auth Lk]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
NA [auth Ll]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
OA [auth Lm]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
PA [auth Ln]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
QA [auth Lo]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
RA [auth Lp]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
SA [auth Lr]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
TA [auth Lz]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth L5]28S ribosomal RNA---
B [auth L7]5S ribosomal RNA---
C [auth L8]5.8S ribosomal RNA---
D [auth LA]60S ribosomal protein L8
E [auth LB]60S ribosomal protein L3
F [auth LC]60S ribosomal protein L4
G [auth LD]60S ribosomal protein L5
H [auth LE]60S ribosomal protein L6
I [auth LF]60S ribosomal protein L7
J [auth LG]60S ribosomal protein L7a
K [auth LH]60S ribosomal protein L9
L [auth LI]60S ribosomal protein L10-like
M [auth LJ]60S ribosomal protein L11
N [auth LL]60S ribosomal protein L13
O [auth LM]60S ribosomal protein L14
P [auth LN]60S ribosomal protein L15
Q [auth LO]60S ribosomal protein L13a
R [auth LP]60S ribosomal protein L17
S [auth LQ]60S ribosomal protein L18
T [auth LR]60S ribosomal protein L19
U [auth LS]60S ribosomal protein L18a
V [auth LT]60S ribosomal protein L21
W [auth LU]60S ribosomal protein L22
X [auth LV]60S ribosomal protein L23
Y [auth LW]60S ribosomal protein L24
Z [auth LX]60S ribosomal protein L23a
AA [auth LY]60S ribosomal protein L26
BA [auth LZ]60S ribosomal protein L27
CA [auth La]60S ribosomal protein L27a
DA [auth Lb]60S ribosomal protein L29
EA [auth Lc]60S ribosomal protein L30
FA [auth Ld]60S ribosomal protein L31
GA [auth Le]60S ribosomal protein L32
HA [auth Lf]60S ribosomal protein L35a
IA [auth Lg]60S ribosomal protein L34
JA [auth Lh]60S ribosomal protein L35
KA [auth Li]60S ribosomal protein L36
LA [auth Lj]60S ribosomal protein L37
MA [auth Lk]60S ribosomal protein L38
NA [auth Ll]60S ribosomal protein L39
OA [auth Lm]Ubiquitin-60S ribosomal protein L40
PA [auth Ln]60S ribosomal protein L41
QA [auth Lo]60S ribosomal protein L36a
RA [auth Lp]60S ribosomal protein L37a
SA [auth Lr]60S ribosomal protein L28
TA [auth Lz]60S ribosomal protein L10a

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth LA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth LA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth LA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth LA]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
D [auth LA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth LA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth LA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth LA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth LA]IPR002171Large ribosomal subunit protein uL2Family
E [auth LB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth LB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
E [auth LB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth LB]IPR000597Large ribosomal subunit protein uL3Family
E [auth LB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth LC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
F [auth LC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth LC]IPR002136Large ribosomal subunit protein uL4Family
F [auth LC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
F [auth LC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth LD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
G [auth LD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
H [auth LE]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
H [auth LE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
H [auth LE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth LE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
H [auth LE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth LE]IPR000915Large ribosomal subunit protein eL6Family
I [auth LF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
I [auth LF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
I [auth LF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
I [auth LF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
I [auth LF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
I [auth LF]IPR039699Large ribosomal subunit protein uL30Family
I [auth LF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
J [auth LG]IPR001921Large ribosomal subunit protein eL8Family
J [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth LG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth LH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth LH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth LH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth LH]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth LI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth LI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
L [auth LI]IPR047873Large ribosomal subunit protein uL16Family
L [auth LI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
L [auth LI]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth LJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth LJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth LJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth LJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth LJ]IPR002132Large ribosomal subunit protein uL5Family
N [auth LL]IPR001380Large ribosomal subunit protein eL13Family
N [auth LL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
O [auth LM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth LM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth LM]IPR039660Large ribosomal subunit protein eL14Family
O [auth LM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
O [auth LM]IPR002784Large ribosomal subunit protein eL14 domainDomain
P [auth LN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth LN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth LN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth LN]IPR000439Large ribosomal subunit protein eL15Family
Q [auth LO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
Q [auth LO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
Q [auth LO]IPR005822Large ribosomal subunit protein uL13Family
Q [auth LO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
R [auth LP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth LP]IPR001063Large ribosomal subunit protein uL22Family
R [auth LP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth LP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
S [auth LQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
S [auth LQ]IPR000039Large ribosomal subunit protein eL18Family
S [auth LQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
S [auth LQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
T [auth LR]IPR039547Large ribosomal subunit protein eL19Family
T [auth LR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
T [auth LR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
T [auth LR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
T [auth LR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
T [auth LR]IPR000196Large ribosomal subunit protein eL19 domainDomain
U [auth LS]IPR028877Large ribosomal subunit protein eL20Family
U [auth LS]IPR023573Large ribosomal subunit protein eL20 domainDomain
U [auth LS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
V [auth LT]IPR001147Large ribosomal subunit protein eL21Family
V [auth LT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth LT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
V [auth LT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
W [auth LU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
W [auth LU]IPR002671Large ribosomal subunit protein eL22Family
X [auth LV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
X [auth LV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
X [auth LV]IPR000218Large ribosomal subunit protein uL14Family
Y [auth LW]IPR011017TRASH domainDomain
Y [auth LW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
Y [auth LW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Y [auth LW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
Z [auth LX]IPR019985Large ribosomal subunit protein uL23Family
Z [auth LX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Z [auth LX]IPR013025Large ribosomal subunit protein uL23-likeFamily
Z [auth LX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth LX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Z [auth LX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
AA [auth LY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth LY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
AA [auth LY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth LY]IPR005824KOWDomain
AA [auth LY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
BA [auth LZ]IPR001141Large ribosomal subunit protein eL27Family
BA [auth LZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BA [auth LZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth LZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BA [auth LZ]IPR005824KOWDomain
BA [auth LZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
CA [auth La]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
CA [auth La]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
CA [auth La]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth La]IPR030878Large ribosomal subunit protein uL15Family
CA [auth La]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth Lb]IPR002673Large ribosomal subunit protein eL29Family
EA [auth Lc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth Lc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth Lc]IPR000231Large ribosomal subunit protein eL30Family
EA [auth Lc]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth Lc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FA [auth Ld]IPR000054Large ribosomal subunit protein eL31Family
FA [auth Ld]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
FA [auth Ld]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
GA [auth Le]IPR001515Large ribosomal subunit protein eL32Family
GA [auth Le]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
GA [auth Le]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
HA [auth Lf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
HA [auth Lf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
HA [auth Lf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
HA [auth Lf]IPR001780Large ribosomal subunit protein eL33Family
IA [auth Lg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
IA [auth Lg]IPR008195Large ribosomal subunit protein eL34Family
JA [auth Lh]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
JA [auth Lh]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
JA [auth Lh]IPR001854Large ribosomal subunit protein uL29Family
JA [auth Lh]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
KA [auth Li]IPR000509Large ribosomal subunit protein eL36Family
KA [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
LA [auth Lj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
LA [auth Lj]IPR001569Large ribosomal subunit protein eL37Family
LA [auth Lj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
LA [auth Lj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth Lk]IPR002675Large ribosomal subunit protein eL38Family
MA [auth Lk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
NA [auth Ll]IPR000077Large ribosomal subunit protein eL39Family
NA [auth Ll]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
NA [auth Ll]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
OA [auth Lm]IPR019954Ubiquitin conserved siteConserved Site
OA [auth Lm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
OA [auth Lm]IPR000626Ubiquitin-like domainDomain
OA [auth Lm]IPR019956Ubiquitin domainDomain
OA [auth Lm]IPR001975Large ribosomal subunit protein eL40 domainDomain
OA [auth Lm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
PA [auth Ln]IPR007836Large ribosomal subunit protein eS32Family
QA [auth Lo]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth Lo]IPR000552Large ribosomal subunit protein eL42Family
RA [auth Lp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
RA [auth Lp]IPR002674Large ribosomal subunit protein eL43Family
RA [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth Lr]IPR029004Ribosomal eL28/Mak16Domain
SA [auth Lr]IPR002672Large ribosomal subunit protein eL28Family
TA [auth Lz]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
TA [auth Lz]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
TA [auth Lz]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
TA [auth Lz]IPR002143Large ribosomal subunit protein uL1Family
TA [auth Lz]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E [auth LB]PharosP39023
F [auth LC]PharosP36578
G [auth LD]PharosP46777
H [auth LE]PharosQ02878
I [auth LF]PharosP18124
J [auth LG]PharosP62424
K [auth LH]PharosP32969
L [auth LI]PharosQ96L21
M [auth LJ]PharosP62913
N [auth LL]PharosP26373
O [auth LM]PharosP50914
P [auth LN]PharosP61313
Q [auth LO]PharosP40429
R [auth LP]PharosP18621
S [auth LQ]PharosQ07020
T [auth LR]PharosP84098
V [auth LT]PharosP46778
W [auth LU]PharosP35268
X [auth LV]PharosP62829
Y [auth LW]PharosP83731
Z [auth LX]PharosP62750
AA [auth LY]PharosP61254
BA [auth LZ]PharosP61353
CA [auth La]PharosP46776
EA [auth Lc]PharosP62888
FA [auth Ld]PharosP62899
GA [auth Le]PharosP62910
HA [auth Lf]PharosP18077
IA [auth Lg]PharosP49207
JA [auth Lh]PharosP42766
KA [auth Li]PharosQ9Y3U8
LA [auth Lj]PharosP61927
MA [auth Lk]PharosP63173
OA [auth Lm]PharosP62987
PA [auth Ln]PharosP62945
QA [auth Lo]PharosP83881
RA [auth Lp]PharosP61513
SA [auth Lr]PharosP46779
TA [auth Lz]PharosP62906