6XYW

Structure of the plant mitochondrial ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth Ac]SCOP2 FamilyRibosomal protein L38095650 4002103 SCOP2 (2022-06-29)
C [auth Ac]SCOP2 SuperfamilyTranslational proteins8095651 3000811 SCOP2 (2022-06-29)
K [auth Ak]SCOP2 FamilyRibosomal protein L148095278 4001826 SCOP2 (2022-06-29)
K [auth Ak]SCOP2 Superfamily50S Ribosomal protein L14-like8095279 3000433 SCOP2 (2022-06-29)
M [auth Am]SCOP2 FamilyRibosomal protein L16p8095346 4003717 SCOP2 (2022-06-29)
M [auth Am]SCOP2 SuperfamilyRibosomal protein L16p/L10e8095347 3000884 SCOP2 (2022-06-29)
Q [auth Aq]SCOP2 FamilyRibosomal protein L208095200 4001930 SCOP2 (2022-06-29)
Q [auth Aq]SCOP2 SuperfamilyRibosomal protein L208095201 3000563 SCOP2 (2022-06-29)
W [auth Aw]SCOP2 FamilyRibosomal L27 protein8094966 4001900 SCOP2 (2022-06-29)
W [auth Aw]SCOP2 SuperfamilyRibosomal L27 protein-like8094967 3000539 SCOP2 (2022-06-29)
CA [auth AE]SCOP2 FamilyRibosomal protein L368093965 4003715 SCOP2 (2022-06-29)
CA [auth AE]SCOP2 SuperfamilyRibosomal protein L368093966 3001346 SCOP2 (2022-06-29)
WA [auth Bl]SCOP2 FamilyRibosomal protein S138100463 4000260 SCOP2 (2022-06-29)
WA [auth Bl]SCOP2 SuperfamilyS13-like H2TH domain8100464 3000053 SCOP2 (2022-06-29)
LB [auth Bg]SCOP2 FamilyRibosomal protein S88100583 4002027 SCOP2 (2022-06-29)
LB [auth Bg]SCOP2 SuperfamilyRibosomal protein S88100584 3000709 SCOP2 (2022-06-29)
YB [auth BE]SCOP2 Familybeta-hydroxyisobutyryl-CoA hydrolase-like8100239 4004188 SCOP2 (2022-06-29)
YB [auth BE]SCOP2 SuperfamilyClpP/crotonase8100240 3000033 SCOP2 (2022-06-29)
J [auth Aj]SCOP2 FamilyRibosomal protein L138100017 4003623 SCOP2 (2022-06-29)
J [auth Aj]SCOP2 SuperfamilyRibosomal protein L138100018 3001134 SCOP2 (2022-06-29)
O [auth Ao]SCOP2 FamilyRibosomal protein L18p and S118100177 4000555 SCOP2 (2022-06-29)
O [auth Ao]SCOP2 SuperfamilyTranslational machinery components8100178 3000571 SCOP2 (2022-06-29)
P [auth Ap]SCOP2 FamilyRibosomal protein L198098169 4001761 SCOP2 (2022-06-29)
P [auth Ap]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8098170 3000334 SCOP2 (2022-06-29)
S [auth As]SCOP2 FamilyRibosomal protein L228099547 4001212 SCOP2 (2022-06-29)
S [auth As]SCOP2 SuperfamilyRibosomal protein L228099548 3001078 SCOP2 (2022-06-29)
B [auth Ab]SCOP2 FamilyC-terminal domain of ribosomal protein L28095576 4001762 SCOP2 (2022-06-29)
B [auth Ab]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8095577 3000334 SCOP2 (2022-06-29)
BA [auth AC]SCOP2 FamilyRibosomal protein L33p8095354 4000511 SCOP2 (2022-06-29)
BA [auth AC]SCOP2 SuperfamilyZn-binding ribosomal proteins8095355 3001320 SCOP2 (2022-06-29)
TA [auth Bf]SCOP2 FamilyRibosomal protein S78098971 4001112 SCOP2 (2022-06-29)
TA [auth Bf]SCOP2 SuperfamilyRibosomal protein S78098972 3000799 SCOP2 (2022-06-29)
UA [auth Bh]SCOP2 FamilyTranslational machinery components8095240 4000951 SCOP2 (2022-06-29)
UA [auth Bh]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like8095241 3000100 SCOP2 (2022-06-29)
E [auth Ad]SCOP2 FamilyRibosomal protein L48100275 4003628 SCOP2 (2022-06-29)
E [auth Ad]SCOP2 SuperfamilyRibosomal protein L48100276 3001146 SCOP2 (2022-06-29)
XA [auth Bm]SCOP2 FamilyRibosomal protein S14p/S29e8100655 4003647 SCOP2 (2022-06-29)
XA [auth Bm]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8100656 3000068 SCOP2 (2022-06-29)
YA [auth Br]SCOP2 FamilyRibosomal protein S198095340 4001081 SCOP2 (2022-06-29)
YA [auth Br]SCOP2 SuperfamilyRibosomal protein S198095341 3000686 SCOP2 (2022-06-29)
MB [auth Bj]SCOP2 FamilyRibosomal protein L18p and S118100277 4000555 SCOP2 (2022-06-29)
MB [auth Bj]SCOP2 SuperfamilyTranslational machinery components8100278 3000571 SCOP2 (2022-06-29)
OB [auth Bo]SCOP2 FamilyRibosomal protein S168095700 4001077 SCOP2 (2022-06-29)
OB [auth Bo]SCOP2 SuperfamilyRibosomal protein S168095701 3000680 SCOP2 (2022-06-29)
PB [auth Bp]SCOP2 FamilyCold shock DNA-binding domain-like8100727 4001909 SCOP2 (2022-06-29)
PB [auth Bp]SCOP2 SuperfamilyNucleic acid-binding proteins8100728 3000135 SCOP2 (2022-06-29)
G [auth Af]SCOP2 FamilyRibosomal protein L68095656 4002033 SCOP2 (2022-06-29)
G [auth Af]SCOP2 SuperfamilyRibosomal protein L68095657 3000724 SCOP2 (2022-06-29)
KC [auth Bk]SCOP2 FamilyCold shock DNA-binding domain-like8094896 4001909 SCOP2 (2022-06-29)
KC [auth Bk]SCOP2 SuperfamilyNucleic acid-binding proteins8094897 3000135 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth Ac]Ribosomal_L3e6xywAc1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
H [auth Ag]Ribosomal_L9_Ne6xywAg1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
K [auth Ak]Ribosomal_L14e6xywAk1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
L [auth Al]Ribosomal_L27Ae6xywAl1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
M [auth Am]Ribosomal_L16e6xywAm1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
Q [auth Aq]Ribosomal_L20e6xywAq1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
W [auth Aw]Ribosomal_L27e6xywAw1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
X [auth Ax]Ribosomal_L28_1e6xywAx1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28_1ECOD (1.6)
Y [auth Ay]MRP-L47e6xywAy1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: MRP-L47ECOD (1.6)
CA [auth AE]Ribosomal_L36e6xywAE1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
FA [auth AH]L51_S25_CI-B8e6xywAH1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
GA [auth AI]MRP-L46e6xywAI1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: MRP-L46ECOD (1.6)
HA [auth AJ]MRP_L53e6xywAJ1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: MRP_L53ECOD (1.6)
VA [auth Bi]Ribosomal_S10e6xywBi1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
WA [auth Bl]Ribosomal_S13_2e6xywBl1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_2ECOD (1.6)
ZA [auth Bw]UNK_F_TYPEe6xywBw1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: UNK_F_TYPEECOD (1.6)
ZA [auth Bw]DAP3_Ne6xywBw2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DAP3_NECOD (1.6)
AB [auth Bx]MRP-S33_1e6xywBx1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: MRP-S33_1ECOD (1.6)
HB [auth Ba]Ribosomal_S2e6xywBa1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
KB [auth Be]Ribosomal_S6_1e6xywBe1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6_1ECOD (1.6)
LB [auth Bg]Ribosomal_S8_N_1e6xywBg1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
LB [auth Bg]Ribosomal_S8_C_1e6xywBg2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
YB [auth BE]ECH_1e6xywBE1 A: a/b three-layered sandwichesX: ClpP/crotonase (From Topology)H: ClpP/crotonase (From Topology)T: ClpP/crotonaseF: ECH_1ECOD (1.6)
A [auth Aa]Ribosomal_L2e6xywAa1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
J [auth Aj]Ribosomal_L13e6xywAj1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
O [auth Ao]Ribosomal_L18pe6xywAo1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
P [auth Ap]Ribosomal_L19e6xywAp1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
R [auth Ar]Ribosomal_L21pe6xywAr1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
S [auth As]Ribosomal_L22e6xywAs1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
B [auth Ab]Ribosomal_L2_C_1e6xywAb1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_1ECOD (1.6)
T [auth At]Ribosomal_L23_2e6xywAt1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
U [auth Au]ribosomal_L24_1e6xywAu1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
V [auth Av]Ribosomal_L25pe6xywAv1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
V [auth Av]Ribosomal_TL5_Ce6xywAv2 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
AA [auth AB]Ribosomal_L32pe6xywAB1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
BA [auth AC]Ribosomal_L33e6xywAC1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
DA [auth AF]UNK_F_TYPEe6xywAF1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: UNK_F_TYPEECOD (1.6)
KA [auth AM]UNK_F_TYPEe6xywAM1 A: alpha arraysX: HTHH: HTHT: wingedF: UNK_F_TYPEECOD (1.6)
D [auth AD]Ribosomal_L35pe6xywAD1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
NA [auth AP]UNK_F_TYPEe6xywAP1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Serralysin-like metalloprotease-C (From Topology)T: Serralysin-like metalloprotease-CF: UNK_F_TYPEECOD (1.6)
TA [auth Bf]Ribosomal_S7_1e6xywBf1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
UA [auth Bh]Ribosomal_S9e6xywBh1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
E [auth Ad]Ribosomal_L4e6xywAd1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
XA [auth Bm]Ribosomal_S14_1e6xywBm1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
YA [auth Br]Ribosomal_S19e6xywBr1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
BB [auth Bz]UNK_F_TYPEe6xywBz1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: UNK_F_TYPEECOD (1.6)
CB [auth BA]UNK_F_TYPEe6xywBA1 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: UNK_F_TYPEECOD (1.6)
F [auth Ae]Ribosomal_L5_Ce6xywAe1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
MB [auth Bj]Ribosomal_S11e6xywBj1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
NB [auth Bn]Ribosomal_S15_1e6xywBn1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
OB [auth Bo]Ribosomal_S16e6xywBo1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
PB [auth Bp]Ribosomal_S17_1e6xywBp1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
QB [auth Bq]Ribosomal_S18e6xywBq1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
G [auth Af]Ribosomal_L6_1e6xywAf1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
RB [auth Bs]UNK_F_TYPEe6xywBs1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: UNK_F_TYPEECOD (1.6)
SB [auth Bu]UNK_F_TYPEe6xywBu1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: UNK_F_TYPEECOD (1.6)
TB [auth Bv]MRP-S26e6xywBv1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: MRP-S26ECOD (1.6)
WB [auth BC]UNK_F_TYPEe6xywBC1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: UNK_F_TYPEECOD (1.6)
HC [auth Az]Ribosomal_L30e6xywAz1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
IC [auth Ah]Ribosomal_L10e6xywAh1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
KC [auth Bk]Ribosom_S12_S23e6xywBk1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
I [auth Ai]Ribosomal_L11e6xywAi2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
I [auth Ai]Ribosomal_L11_Ne6xywAi1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth Ac]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
H [auth Ag]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
K [auth Ak]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
L [auth Al]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
M [auth Am]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
Q [auth Aq]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
W [auth Aw]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
X [auth Ax]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
Y [auth Ay]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
CA [auth AE]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
FA [auth AH]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
HA [auth AJ]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
VA [auth Bi]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
WA [auth Bl]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
AB [auth Bx]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
DB [auth Bt]PF17067Ribosomal protein S31e (RPS31)Ribosomal protein S31e- Family
EB [auth BG]PF01535PPR repeat (PPR)PPR repeat- Repeat
EB [auth BG]PF13041PPR repeat family (PPR_2)PPR repeat family- Repeat
HB [auth Ba]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
JB [auth Bd]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
JB [auth Bd]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
KB [auth Be]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
LB [auth Bg]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
YB [auth BE]PF16113Enoyl-CoA hydratase/isomerase (ECH_2)Enoyl-CoA hydratase/isomeraseThis family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from Pfam:PF00378 in the structure of it's ...This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from Pfam:PF00378 in the structure of it's C-terminus.
Domain
A [auth Aa]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
J [auth Aj]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
N [auth An]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
O [auth Ao]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
P [auth Ap]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
R [auth Ar]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
S [auth As]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
B [auth Ab]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
T [auth At]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
U [auth Au]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
U [auth Au]PF00467KOW motif (KOW)KOW motif- Family
V [auth Av]PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
AA [auth AB]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BA [auth AC]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
EA [auth AG]PF09809Mitochondrial ribosomal protein L27 (MRP-L27)Mitochondrial ribosomal protein L27- Family
MA [auth AO]PF01535PPR repeat (PPR)PPR repeat- Repeat
D [auth AD]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
OA [auth AQ]PF13812Pentatricopeptide repeat domain (PPR_3)Pentatricopeptide repeat domain- Repeat
OA [auth AQ]PF01535PPR repeat (PPR)PPR repeat- Repeat
OA [auth AQ]PF13041PPR repeat family (PPR_2)PPR repeat family- Repeat
SA [auth Bb]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
TA [auth Bf]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
UA [auth Bh]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
E [auth Ad]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
XA [auth Bm]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
YA [auth Br]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
BB [auth Bz]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
CB [auth BA]PF16860CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, (CX9C)CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,CX9C is the first half of a twin Cx9C motif in eukaryotic proteins. The function of this motif is to import nuclear-encoded mitochondrial intermembrane-space-proteins into the IMS (intermembrane space), as these latter lack a mitochondrial targeting ...CX9C is the first half of a twin Cx9C motif in eukaryotic proteins. The function of this motif is to import nuclear-encoded mitochondrial intermembrane-space-proteins into the IMS (intermembrane space), as these latter lack a mitochondrial targeting sequence. The Cx9C proteins have a disulfide-bonded alpha-hairpin conformation. Cx9C-containing proteins are thus putative substrates for the Mia40-dependent thiol-disulfide exchange mechanism that carries out an oxidative folding process resulting in the proteins being trapped in the IMS [1].
Domain
IB [auth Bc]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MB [auth Bj]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
NB [auth Bn]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
OB [auth Bo]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PB [auth Bp]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
QB [auth Bq]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
G [auth Af]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
RB [auth Bs]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
UB [auth By]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
WB [auth BC]PF09597IGR protein motif (IGR)IGR protein motifThis domain is found in fungal proteins and contains a conserved IGR motif. Its function is unknown.Domain
XB [auth BD]PF12298Eukaryotic mitochondrial regulator protein (Bot1p)Eukaryotic mitochondrial regulator protein- Family
HC [auth Az]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
IC [auth Ah]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
KC [auth Bk]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
I [auth Ai]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
I [auth Ai]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth Ac]50S ribosomal protein L3-2, mitochondrial
H [auth Ag]Ribosomal protein L9/RNase H1
K [auth Ak]50S ribosomal protein HLP, mitochondrial
L [auth Al]Ribosomal protein L18e/L15 superfamily protein
M [auth Am]60S ribosomal protein L16, mitochondrial
Q [auth Aq]50S ribosomal protein L20
W [auth Aw]50S ribosomal protein L27
X [auth Ax]AT4g31460/F3L17_30 -
Y [auth Ay]At1g07830/F24B9_7
CA [auth AE]Ribosomal protein
FA [auth AH]Mitochondrial ribosomal protein L51/S25/CI-B8 family protein
GA [auth AI]At1g14620/T5E21_15 -
HA [auth AJ]39S ribosomal protein- -
JA [auth AL]Uncharacterized protein At1g27435/F17L21.30- - -
RA [auth 3]RNA (118-MER)---
VA [auth Bi]40S ribosomal protein S10, mitochondrial
WA [auth Bl]Small ribosomal subunit protein S13, mitochondrial
ZA [auth Bw]Mitochondrial 28S ribosomal protein S29-like protein- -
AB [auth Bx]37S ribosomal protein S27- -
DB [auth Bt]30S ribosomal protein S31, mitochondrial- -
EB [auth BG]Pentatricopeptide repeat-containing protein At3g02650, mitochondrial -
HB [auth Ba]Ribosomal protein S2, mitochondrial
JB [auth Bd]At1g64880
KB [auth Be]Translation elongation factor EF1B/ribosomal protein S6 family protein -
LB [auth Bg]40S ribosomal protein S15a-5
YB [auth BE]3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial -
AC [auth BJ]rPPR*---
JC [auth BK]rPPR*---
A [auth Aa]60S ribosomal protein L2, mitochondrial
J [auth Aj]At1g01640
N [auth An]At5g09770
O [auth Ao]At5g27820
P [auth Ap]At1g24240/F3I6_17
R [auth Ar]50S ribosomal protein L21, mitochondrial
S [auth As]AT1G52370 protein
B [auth Ab]Expressed protein
T [auth At]At4g39880
U [auth Au]50S ribosomal protein L24
V [auth Av]Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein
Z [auth AA]Ribosomal protein L31- -
AA [auth AB]At1g26740/T24P13_11
BA [auth AC]At3g06320
DA [auth AF]At4g05400 -
EA [auth AG]At5g40080 -
IA [auth AK]At4g22000- - -
KA [auth AM]At1g73940/F2P9_19 - -
LA [auth AN]At3g51010- -
MA [auth AO]Pentatricopeptide repeat-containing protein At1g60770 -
D [auth AD]Ribosomal protein L35
NA [auth AP]rPPR*---
OA [auth AQ]Pentatricopeptide repeat-containing protein PNM1, mitochondrial
PA [auth AR]UNK-6---
QA [auth 1]RNA (2842-MER)---
SA [auth Bb]Ribosomal protein S3, mitochondrial
TA [auth Bf]Ribosomal protein S7, mitochondrial
UA [auth Bh]30S ribosomal protein S9, mitochondrial
E [auth Ad]50S ribosomal protein L4
XA [auth Bm]At2g34520
YA [auth Br]40S ribosomal protein S19, mitochondrial
BB [auth Bz]AT3G18240 protein
CB [auth BA]CX9C domain-containing protein
FB [auth BP]UNK-5---
GB [auth BF]mS31/mS46---
F [auth Ae]60S ribosomal protein L5, mitochondrial
IB [auth Bc]Ribosomal protein S4, mitochondrial
MB [auth Bj]Probable ribosomal protein S11, mitochondrial
NB [auth Bn]At1g15810/F7H2_23
OB [auth Bo]30S ribosomal protein S16-2, chloroplastic/mitochondrial
PB [auth Bp]Nucleic acid-binding, OB-fold-like protein
QB [auth Bq]F10K1.8 protein
G [auth Af]Putative ribosomal protein L6
RB [auth Bs]Ribosomal protein S21 family protein
SB [auth Bu]Uncharacterized protein- - -
TB [auth Bv]AT5g49210/K21P3_8- - -
UB [auth By]28S ribosomal S34 protein
VB [auth BB]mS38---
WB [auth BC]At5g26800 - -
XB [auth BD]Gb|AAC32909.1-
ZB [auth BI]rPPR*---
BC [auth BH]Adenylyl cyclase -
CC [auth BN]UNK-3---
DC [auth BM]UNK-2---
EC [auth BO]UNK-4---
FC [auth BL]UNK-1---
GC [auth 2]RNA (1743-MER)---
HC [auth Az]At5g55140
IC [auth Ah]50S ribosomal protein L10- -
KC [auth Bk]Ribosomal protein S12, mitochondrial
I [auth Ai]At4g35490

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth Ac]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
C [auth Ac]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
C [auth Ac]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
C [auth Ac]IPR000597Large ribosomal subunit protein uL3Family
H [auth Ag]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth Ag]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth Ag]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth Ag]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
H [auth Ag]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth Ag]IPR000244Large ribosomal subunit protein bL9Family
K [auth Ak]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
K [auth Ak]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
K [auth Ak]IPR000218Large ribosomal subunit protein uL14Family
K [auth Ak]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
L [auth Al]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
L [auth Al]IPR021131Large ribosomal subunit protein uL15/eL18Domain
L [auth Al]IPR030878Large ribosomal subunit protein uL15Family
L [auth Al]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth Am]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
M [auth Am]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
M [auth Am]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
M [auth Am]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth Am]IPR047873Large ribosomal subunit protein uL16Family
Q [auth Aq]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Q [auth Aq]IPR005813Large ribosomal subunit protein bL20Family
W [auth Aw]IPR001684Large ribosomal subunit protein bL27Family
W [auth Aw]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
X [auth Ax]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
X [auth Ax]IPR026569Large ribosomal subunit protein bL28Family
X [auth Ax]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
Y [auth Ay]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
Y [auth Ay]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
Y [auth Ay]IPR001854Large ribosomal subunit protein uL29Family
Y [auth Ay]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
CA [auth AE]IPR000473Large ribosomal subunit protein bL36Family
CA [auth AE]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
FA [auth AH]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
FA [auth AH]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
FA [auth AH]IPR039927Large ribosomal subunit protein mL43Family
GA [auth AI]IPR040008Large ribosomal subunit protein mL46Family
HA [auth AJ]IPR019716Large ribosomal subunit protein mL53Family
HA [auth AJ]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
VA [auth Bi]IPR001848Small ribosomal subunit protein uS10Family
VA [auth Bi]IPR027486Small ribosomal subunit protein uS10 domainDomain
VA [auth Bi]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
WA [auth Bl]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
WA [auth Bl]IPR001892Small ribosomal subunit protein uS13Family
WA [auth Bl]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
WA [auth Bl]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
ZA [auth Bw]IPR019368Small ribosomal subunit protein mS29Family
AB [auth Bx]IPR013219Small ribosomal subunit protein mS33Family
DB [auth Bt]IPR044695Small ribosomal subunit protein bTHXc/bTHXc, plantFamily
DB [auth Bt]IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
EB [auth BG]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
EB [auth BG]IPR002885Pentatricopeptide repeatRepeat
HB [auth Ba]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
HB [auth Ba]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
HB [auth Ba]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
HB [auth Ba]IPR001865Small ribosomal subunit protein uS2Family
JB [auth Bd]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
JB [auth Bd]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
JB [auth Bd]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
JB [auth Bd]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
KB [auth Be]IPR000529Small ribosomal subunit protein bS6Family
KB [auth Be]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
KB [auth Be]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
LB [auth Bg]IPR000630Small ribosomal subunit protein uS8Family
LB [auth Bg]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
LB [auth Bg]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
YB [auth BE]IPR029045ClpP/crotonase-like domain superfamilyHomologous Superfamily
YB [auth BE]IPR032259Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H typeFamily
YB [auth BE]IPR045004Enoyl-CoA hydratase/isomerase domainDomain
A [auth Aa]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A [auth Aa]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
A [auth Aa]IPR002171Large ribosomal subunit protein uL2Family
J [auth Aj]IPR005822Large ribosomal subunit protein uL13Family
J [auth Aj]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
J [auth Aj]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
N [auth An]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
N [auth An]IPR000456Large ribosomal subunit protein bL17Family
O [auth Ao]IPR005484Large ribosomal subunit protein uL18Family
P [auth Ap]IPR001857Large ribosomal subunit protein bL19Family
P [auth Ap]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
P [auth Ap]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
R [auth Ar]IPR001787Large ribosomal subunit protein bL21Family
R [auth Ar]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
R [auth Ar]IPR028909Large ribosomal subunit protein bL21-likeFamily
R [auth Ar]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
S [auth As]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
S [auth As]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth As]IPR001063Large ribosomal subunit protein uL22Family
S [auth As]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
B [auth Ab]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
B [auth Ab]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
B [auth Ab]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
B [auth Ab]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
B [auth Ab]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
B [auth Ab]IPR002171Large ribosomal subunit protein uL2Family
T [auth At]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
T [auth At]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
T [auth At]IPR013025Large ribosomal subunit protein uL23-likeFamily
U [auth Au]IPR003256Large ribosomal subunit protein uL24Family
U [auth Au]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
U [auth Au]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth Au]IPR005824KOWDomain
U [auth Au]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth Au]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
V [auth Av]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
V [auth Av]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
V [auth Av]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
V [auth Av]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
Z [auth AA]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth AB]IPR002677Large ribosomal subunit protein bL32Family
AA [auth AB]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth AC]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth AC]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth AC]IPR001705Large ribosomal subunit protein bL33Family
DA [auth AF]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
EA [auth AG]IPR019189Large ribosomal subunit protein mL41Family
MA [auth AO]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
MA [auth AO]IPR002885Pentatricopeptide repeatRepeat
D [auth AD]IPR021137Large ribosomal subunit protein bL35-likeFamily
D [auth AD]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
OA [auth AQ]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
OA [auth AQ]IPR002885Pentatricopeptide repeatRepeat
SA [auth Bb]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
SA [auth Bb]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
SA [auth Bb]IPR044954Small ribosomal subunit protein uS3m, plantFamily
SA [auth Bb]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
TA [auth Bf]IPR034643Mitochondrial ribosomal protein S7, plantsFamily
TA [auth Bf]IPR000235Small ribosomal subunit protein uS7Family
TA [auth Bf]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
TA [auth Bf]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
TA [auth Bf]IPR023798Small ribosomal subunit protein uS7 domainDomain
UA [auth Bh]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
UA [auth Bh]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
UA [auth Bh]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
UA [auth Bh]IPR000754Small ribosomal subunit protein uS9Family
UA [auth Bh]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
E [auth Ad]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth Ad]IPR002136Large ribosomal subunit protein uL4Family
E [auth Ad]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
XA [auth Bm]IPR001209Small ribosomal subunit protein uS14Family
XA [auth Bm]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
YA [auth Br]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
YA [auth Br]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
YA [auth Br]IPR000504RNA recognition motif domainDomain
YA [auth Br]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
YA [auth Br]IPR002222Small ribosomal subunit protein uS19Family
YA [auth Br]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
YA [auth Br]IPR035979RNA-binding domain superfamilyHomologous Superfamily
YA [auth Br]IPR048289NsCP33-like, RNA recognition motif 2Domain
BB [auth Bz]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
BB [auth Bz]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
CB [auth BA]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
CB [auth BA]IPR017264Small ribosomal subunit protein mS37, fungal-typeFamily
CB [auth BA]IPR031731IMS import disulfide relay-system, CHCH-CHCH-like Cx9CDomain
F [auth Ae]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth Ae]IPR002132Large ribosomal subunit protein uL5Family
IB [auth Bc]IPR002942RNA-binding S4 domainDomain
IB [auth Bc]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IB [auth Bc]IPR022801Small ribosomal subunit protein uS4Family
MB [auth Bj]IPR001971Small ribosomal subunit protein uS11Family
MB [auth Bj]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
NB [auth Bn]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
NB [auth Bn]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
NB [auth Bn]IPR000589Small ribosomal subunit protein uS15Family
OB [auth Bo]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
OB [auth Bo]IPR000307Small ribosomal subunit protein bS16Family
PB [auth Bp]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
PB [auth Bp]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
PB [auth Bp]IPR000266Small ribosomal subunit protein uS17Family
QB [auth Bq]IPR001648Small ribosomal subunit protein bS18Family
QB [auth Bq]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
G [auth Af]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
G [auth Af]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
G [auth Af]IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth Af]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
G [auth Af]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
RB [auth Bs]IPR001911Small ribosomal subunit protein bS21Family
UB [auth By]IPR032053Small ribosomal subunit protein mS34Family
WB [auth BC]IPR019083IGR domainDomain
BC [auth BH]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
HC [auth Az]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
HC [auth Az]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
HC [auth Az]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IC [auth Ah]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
IC [auth Ah]IPR001790Large ribosomal subunit protein uL10Family
IC [auth Ah]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
KC [auth Bk]IPR006032Small ribosomal subunit protein uS12Family
KC [auth Bk]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KC [auth Bk]IPR005679Ribosomal protein uS12, bacterial-typeFamily
I [auth Ai]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
I [auth Ai]IPR000911Ribosomal protein uL11Family
I [auth Ai]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
I [auth Ai]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
I [auth Ai]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
I [auth Ai]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily