6WOO

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth G]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
L [auth I]SCOP2B SuperfamilyRibosomal protein L16p/L10e8079407 3000884 SCOP2B (2022-06-29)
M [auth J]SCOP2B SuperfamilyRL5-like8099392 3001709 SCOP2B (2022-06-29)
N [auth L]SCOP2B SuperfamilyRibosomal protein L13e-like8053159 3002162 SCOP2B (2022-06-29)
P [auth N]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
Q [auth O]SCOP2B SuperfamilyRibosomal protein L138066053 3001134 SCOP2B (2022-06-29)
R [auth P]SCOP2B SuperfamilyRibosomal protein L228076708 3001078 SCOP2B (2022-06-29)
S [auth Q]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095970 3001045 SCOP2B (2022-06-29)
T [auth R]SCOP2B SuperfamilyRibosomal protein L19 (L19e)8077485 3000890 SCOP2B (2022-06-29)
W [auth U]SCOP2B Superfamily60S Ribosomal protein L22e8053058 3002158 SCOP2B (2022-06-29)
X [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like8103364 3000433 SCOP2B (2022-06-29)
Z [auth X]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095962 3000210 SCOP2B (2022-06-29)
AA [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
BA [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053046 3000334 SCOP2B (2022-06-29)
CA [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077127 3001045 SCOP2B (2022-06-29)
DA [auth b]SCOP2B SuperfamilyRibosomal protein L29e8053045 3002157 SCOP2B (2022-06-29)
EA [auth c]SCOP2B SuperfamilyL30e-like8039862 3001739 SCOP2B (2022-06-29)
HA [auth f]SCOP2B SuperfamilyTranslational proteins8087451 3000811 SCOP2B (2022-06-29)
IA [auth g]SCOP2B SuperfamilyRibosomal protein L34e-like8053547 3002203 SCOP2B (2022-06-29)
KA [auth i]SCOP2B SuperfamilyRibosomal protein L36e8053115 3002161 SCOP2B (2022-06-29)
LA [auth j]SCOP2B SuperfamilyZn-binding ribosomal proteins8080044 3001320 SCOP2B (2022-06-29)
MA [auth k]SCOP2B SuperfamilyRibosomal L38e protein-like8053562 3002206 SCOP2B (2022-06-29)
NA [auth l]SCOP2B SuperfamilyRibosomal protein L39e8078549 3001756 SCOP2B (2022-06-29)
RA [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins8103126 3001320 SCOP2B (2022-06-29)
SA [auth q]SCOP2 FamilyRibosomal protein L1p/L10e-like8098447 4002929 SCOP2 (2022-06-29)
SA [auth q]SCOP2 SuperfamilyRibosomal protein L1p/L10e-like8098448 3001911 SCOP2 (2022-06-29)
VA [auth AA]SCOP2 FamilyRibosomal protein S2-like8098699 4003744 SCOP2 (2022-06-29)
VA [auth AA]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like8098700 3001397 SCOP2 (2022-06-29)
WA [auth BB]SCOP2 FamilyRibosomal S3Ae8098587 4006095 SCOP2 (2022-06-29)
WA [auth BB]SCOP2 SuperfamilyRibosomal S3Ae-like8098588 3002166 SCOP2 (2022-06-29)
E [auth B]SCOP2B SuperfamilyTranslational proteins8078363 3000811 SCOP2B (2022-06-29)
ZA [auth EE]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052758 3001473 SCOP2B (2022-06-29)
ZA [auth EE]SCOP2B SuperfamilyNucleic acid-binding proteins8052759 3000135 SCOP2B (2022-06-29)
ZA [auth EE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052760 3000334 SCOP2B (2022-06-29)
AB [auth FF]SCOP2B SuperfamilyRibosomal protein S78065999 3000799 SCOP2B (2022-06-29)
BB [auth GG]SCOP2B SuperfamilyGS N-terminal domain-like8053173 3000408 SCOP2B (2022-06-29)
DB [auth II]SCOP2B Superfamily50S Ribosomal protein L14-like8053083 3000433 SCOP2B (2022-06-29)
FB [auth KK]SCOP2B SuperfamilyWinged helix DNA-binding domain8055713 3000034 SCOP2B (2022-06-29)
GB [auth LL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052736 3002138 SCOP2B (2022-06-29)
GB [auth LL]SCOP2B SuperfamilyNucleic acid-binding proteins8052738 3000135 SCOP2B (2022-06-29)
F [auth C]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052815 3002143 SCOP2B (2022-06-29)
F [auth C]SCOP2B SuperfamilyRibosomal protein L48052816 3001146 SCOP2B (2022-06-29)
HB [auth MM]SCOP2B SuperfamilyL30e-like8096946 3001739 SCOP2B (2022-06-29)
IB [auth NN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052974 3001284 SCOP2B (2022-06-29)
IB [auth NN]SCOP2B SuperfamilyHomeodomain-like8052973 3000001 SCOP2B (2022-06-29)
JB [auth OO]SCOP2B SuperfamilyTranslational machinery components8098660 3000571 SCOP2B (2022-06-29)
KB [auth PP]SCOP2B SuperfamilyRibosomal protein S198086076 3000686 SCOP2B (2022-06-29)
LB [auth QQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8103366 3000100 SCOP2B (2022-06-29)
NB [auth SS]SCOP2B SuperfamilyS13-like H2TH domain8098450 3000053 SCOP2B (2022-06-29)
PB [auth UU]SCOP2B SuperfamilyRibosomal protein S108098648 3001336 SCOP2B (2022-06-29)
QB [auth VV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053136 3000068 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyTranslational machinery components8052875 3000571 SCOP2B (2022-06-29)
RB [auth WW]SCOP2B SuperfamilyRibosomal protein S88096922 3000709 SCOP2B (2022-06-29)
UB [auth ZZ]SCOP2B SuperfamilyWinged helix DNA-binding domain8059235 3000034 SCOP2B (2022-06-29)
VB [auth aa]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053149 3000068 SCOP2B (2022-06-29)
XB [auth cc]SCOP2B SuperfamilyNucleic acid-binding proteins8063430 3000135 SCOP2B (2022-06-29)
YB [auth dd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052569 3000068 SCOP2B (2022-06-29)
ZB [auth ee]SCOP2B SuperfamilyRibosomal protein S30e-like8053451 3002190 SCOP2B (2022-06-29)
H [auth E]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053109 3000334 SCOP2B (2022-06-29)
I [auth F]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052916 3002152 SCOP2B (2022-06-29)
I [auth F]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052917 3001378 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth G]Ribosomal_L7Ae_1e6wooG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
K [auth H]Ribosomal_L6_2e6wooH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
K [auth H]Ribosomal_L6e6wooH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
L [auth I]Ribosomal_L16e6wooI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
M [auth J]Ribosomal_L5_Ce6wooJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
N [auth L]Ribosomal_L13ee6wooL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
O [auth M]Ribosomal_L14ee6wooM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
P [auth N]Ribosomal_L15ee6wooN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
Q [auth O]Ribosomal_L13e6wooO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
R [auth P]Ribosomal_L22e6wooP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth Q]Ribosomal_L18e6wooQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
T [auth R]Ribosomal_L19e_Ne6wooR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
T [auth R]Ribosomal_L19e_Ce6wooR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
U [auth S]Ribosomal_L18Ae6wooS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
V [auth T]Ribosomal_L21ee6wooT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
W [auth U]Ribosomal_L22ee6wooU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
X [auth V]Ribosomal_L14e6wooV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
Y [auth W]Ribosomal_L24ee6wooW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
Z [auth X]Ribosomal_L23_3e6wooX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
AA [auth Y]Ribosomal_L26e6wooY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
BA [auth Z]Ribosomal_L27ee6wooZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
CA [auth a]Ribosomal_L18e6wooa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
DA [auth b]Ribosomal_L29ee6woob1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
EA [auth c]Ribosomal_L7Aee6wooc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
FA [auth d]Ribosomal_L31ee6wood1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
GA [auth e]Ribosomal_L32ee6wooe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
HA [auth f]Ribosomal_L35Aee6woof1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
IA [auth g]Ribosomal_L34ee6woog1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
JA [auth h]Ribosomal_L29_2e6wooh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
KA [auth i]Ribosomal_L36ee6wooi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
LA [auth j]Ribosomal_L37ee6wooj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
MA [auth k]Ribosomal_L38ee6wook1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
D [auth A]Ribosomal_L2_1e6wooA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
D [auth A]Ribosomal_L2_C_2e6wooA1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
NA [auth l]Ribosomal_L39e6wool1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
OA [auth m]Ribosomal_L40ee6woom1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
PA [auth n]Ribosomal_L41e6woon1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
QA [auth o]Ribosomal_L44e6wooo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
RA [auth p]Ribosomal_L37aee6woop1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
SA [auth q]Ribosomal_L1_2nd_1e6wooq2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
SA [auth q]Ribosomal_L1_1st_1e6wooq1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
TA [auth r]Ribosomal_L10e6woor1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
TA [auth r]Ribosomal_P0_L10ee6woor2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
VA [auth AA]Ribosomal_S2_2e6wooAA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
WA [auth BB]Ribosomal_S3Ae_Ne6wooBB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
WA [auth BB]Ribosomal_S3Ae_Ce6wooBB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
E [auth B]Ribosomal_L3e6wooB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
XA [auth CC]Ribosomal_S5_C_1e6wooCC2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
XA [auth CC]Ribosomal_S5_3e6wooCC1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
XA [auth CC]Ribosomal_S5_2e6wooCC3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
YA [auth DD]Ribosomal_S3_Ce6wooDD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
YA [auth DD]KH_2_3e6wooDD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
ZA [auth EE]Ribosomal_S4ee6wooEE1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
ZA [auth EE]40S_S4_Ce6wooEE2 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
ZA [auth EE]RS4NTe6wooEE3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
AB [auth FF]Ribosomal_S7_1e6wooFF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
BB [auth GG]Ribosomal_S6ee6wooGG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
CB [auth HH]Ribosomal_S7e_Ne6wooHH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
CB [auth HH]Ribosomal_S7e_C_2e6wooHH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_2ECOD (1.6)
DB [auth II]Ribosomal_S8ee6wooII1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
EB [auth JJ]S4e6wooJJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
FB [auth KK]S10_plectine6wooKK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
GB [auth LL]Ribosomal_S17_1e6wooLL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
F [auth C]Ribosomal_L4e6wooC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth C]Ribos_L4_asso_Ce6wooC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
HB [auth MM]Ribosomal_L7Aee6wooMM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
IB [auth NN]Ribosomal_S13_Ne6wooNN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
IB [auth NN]Ribosomal_S15_2e6wooNN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
JB [auth OO]Ribosomal_S11e6wooOO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
KB [auth PP]Ribosomal_S19e6wooPP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
LB [auth QQ]Ribosomal_S9e6wooQQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
MB [auth RR]Ribosomal_S17ee6wooRR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
NB [auth SS]Ribosomal_S13e6wooSS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
OB [auth TT]Ribosomal_S19ee6wooTT1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
PB [auth UU]Ribosomal_S10_1e6wooUU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
QB [auth VV]Ribosomal_S21ee6wooVV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
G [auth D]Ribosomal_L5ee6wooD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
RB [auth WW]Ribosomal_S8_N_1e6wooWW1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
RB [auth WW]Ribosomal_S8_C_1e6wooWW2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
SB [auth XX]Ribosom_S12_S23e6wooXX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
TB [auth YY]Ribosomal_S24ee6wooYY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
UB [auth ZZ]Ribosomal_S25e6wooZZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
VB [auth aa]Ribosomal_S26ee6wooaa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
WB [auth bb]Ribosomal_S27ee6woobb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
XB [auth cc]Ribosomal_S28ee6woocc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
YB [auth dd]Ribosomal_S14_2e6woodd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
ZB [auth ee]Ribosomal_S30e6wooee1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
AC [auth ff]Ribosomal_S27e6wooff1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
H [auth E]Ribosomal_L6ee6wooE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
BC [auth gg]ANAPC4_WD40_2e6woogg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_2ECOD (1.6)
DC [auth 1]GTP_EFTU_D2_2e6woo11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2_2ECOD (1.6)
DC [auth 1]GTP_EFTU_D4e6woo13 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D4ECOD (1.6)
DC [auth 1]MnmE_helical_2nde6woo12 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
DC [auth 1]IF-2e6woo14 A: a/b three-layered sandwichesX: Initiation factor IF2/eIF5b, domain 3 (From Topology)H: Initiation factor IF2/eIF5b, domain 3 (From Topology)T: Initiation factor IF2/eIF5b, domain 3F: IF-2ECOD (1.6)
I [auth F]Ribosomal_L30_1e6wooF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
L [auth I]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
M [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
N [auth L]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
O [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
O [auth M]PF00467KOW motif (KOW)KOW motif- Family
P [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
Q [auth O]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
R [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
S [auth Q]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
T [auth R]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
U [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
V [auth T]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
W [auth U]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
X [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Y [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
Z [auth X]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
Z [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
AA [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
AA [auth Y]PF00467KOW motif (KOW)KOW motif- Family
BA [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
CA [auth a]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
DA [auth b]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
EA [auth c]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
FA [auth d]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
GA [auth e]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
HA [auth f]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
IA [auth g]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
JA [auth h]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
KA [auth i]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
LA [auth j]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
MA [auth k]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
D [auth A]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
D [auth A]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
NA [auth l]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
OA [auth m]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
QA [auth o]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
RA [auth p]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
SA [auth q]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
TA [auth r]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
TA [auth r]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
VA [auth AA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
WA [auth BB]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
E [auth B]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
XA [auth CC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
XA [auth CC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
YA [auth DD]PF07650KH domain (KH_2)KH domain- Domain
YA [auth DD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
ZA [auth EE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
ZA [auth EE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
ZA [auth EE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
ZA [auth EE]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
ZA [auth EE]PF00467KOW motif (KOW)KOW motif- Family
AB [auth FF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
BB [auth GG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
CB [auth HH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
DB [auth II]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
EB [auth JJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
EB [auth JJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
FB [auth KK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
GB [auth LL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
GB [auth LL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
F [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
F [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
HB [auth MM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
IB [auth NN]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
IB [auth NN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
JB [auth OO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
KB [auth PP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
LB [auth QQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
MB [auth RR]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
NB [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
OB [auth TT]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
PB [auth UU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
QB [auth VV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
G [auth D]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
G [auth D]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
RB [auth WW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
SB [auth XX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
TB [auth YY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
UB [auth ZZ]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
VB [auth aa]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
WB [auth bb]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
XB [auth cc]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
YB [auth dd]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
ZB [auth ee]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
AC [auth ff]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
H [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
BC [auth gg]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
DC [auth 1]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
DC [auth 1]PF14578Elongation factor Tu domain 4 (GTP_EFTU_D4)Elongation factor Tu domain 4Elongation factor Tu consists of several structural domains, and this is usually the fourth.Domain
DC [auth 1]PF11987Translation-initiation factor 2 (IF-2)Translation-initiation factor 2IF-2 is a translation initiator in each of the three main phylogenetic domains (Eukaryotes [1], Bacteria [2] and Archaea [3]). IF2 interacts with formylmethionine-tRNA, GTP, IF1, IF3 and both ribosomal subunits [2]. Through these interactions, IF2 pr ...IF-2 is a translation initiator in each of the three main phylogenetic domains (Eukaryotes [1], Bacteria [2] and Archaea [3]). IF2 interacts with formylmethionine-tRNA, GTP, IF1, IF3 and both ribosomal subunits [2]. Through these interactions, IF2 promotes the binding of the initiator tRNA to the A site in the smaller ribosomal subunit and catalyses the hydrolysis of GTP following initiation-complex formation [2].
Domain
I [auth F]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
I [auth F]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 5]25S ribosomal RNA---
J [auth G]eL8
K [auth H]uL6
L [auth I]uL16
M [auth J]uL5
N [auth L]eL13
O [auth M]eL14
P [auth N]eL15
Q [auth O]uL13
R [auth P]uL22
S [auth Q]eL18
B [auth 7]5S ribosomal RNA---
T [auth R]eL19
U [auth S]eL20
V [auth T]eL21
W [auth U]eL22
X [auth V]uL14
Y [auth W]eL24
Z [auth X]uL23
AA [auth Y]uL24
BA [auth Z]eL27
CA [auth a]uL15
C [auth 8]5.8S ribosomal rRNA---
DA [auth b]eL29
EA [auth c]eL30
FA [auth d]eL31
GA [auth e]eL32
HA [auth f]eL33
IA [auth g]eL34
JA [auth h]uL29
KA [auth i]eL36
LA [auth j]eL37
MA [auth k]eL38
D [auth A]uL2
NA [auth l]eL39
OA [auth m]eL40
PA [auth n]eL41---
QA [auth o]eL42
RA [auth p]eL43
SA [auth q]uL1
TA [auth r]uL10
UA [auth K]L10---
VA [auth AA]uS2
WA [auth BB]eS1
E [auth B]uL3
XA [auth CC]uS5
YA [auth DD]uS3
ZA [auth EE]eS4
AB [auth FF]uS7
BB [auth GG]eS6
CB [auth HH]eS7
DB [auth II]eS8
EB [auth JJ]uS4
FB [auth KK]eS10
GB [auth LL]uS17
F [auth C]uL4
HB [auth MM]eS12
IB [auth NN]uS15
JB [auth OO]uS11
KB [auth PP]uS19
LB [auth QQ]uS19
MB [auth RR]eS17
NB [auth SS]uS13
OB [auth TT]eS19
PB [auth UU]uS10
QB [auth VV]eS21
G [auth D]uL18
RB [auth WW]uS8
SB [auth XX]uS12
TB [auth YY]eS24
UB [auth ZZ]eS25
VB [auth aa]eS26
WB [auth bb]eS27
XB [auth cc]eS28
YB [auth dd]uS14
ZB [auth ee]eS30
AC [auth ff]eS31
H [auth E]eL6
BC [auth gg]RACK1
CC [auth 2]18S ribosomal RNA---
DC [auth 1]eIF5B
EC [auth 3]Met-tRNA-iMet---
FC [auth 4]mRNA---
I [auth F]uL30

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth G]IPR001921Large ribosomal subunit protein eL8Family
J [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth H]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth I]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth I]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
L [auth I]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth I]IPR047873Large ribosomal subunit protein uL16Family
L [auth I]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
M [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth J]IPR002132Large ribosomal subunit protein uL5Family
N [auth L]IPR001380Large ribosomal subunit protein eL13Family
N [auth L]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
O [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth M]IPR039660Large ribosomal subunit protein eL14Family
O [auth M]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
O [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
O [auth M]IPR005824KOWDomain
P [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth N]IPR000439Large ribosomal subunit protein eL15Family
Q [auth O]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
Q [auth O]IPR005822Large ribosomal subunit protein uL13Family
Q [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
Q [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
R [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth P]IPR001063Large ribosomal subunit protein uL22Family
R [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
S [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
S [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
S [auth Q]IPR000039Large ribosomal subunit protein eL18Family
S [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
T [auth R]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
T [auth R]IPR039547Large ribosomal subunit protein eL19Family
T [auth R]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
T [auth R]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
T [auth R]IPR000196Large ribosomal subunit protein eL19 domainDomain
T [auth R]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
U [auth S]IPR028877Large ribosomal subunit protein eL20Family
U [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
U [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
V [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
V [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
V [auth T]IPR001147Large ribosomal subunit protein eL21Family
V [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth U]IPR002671Large ribosomal subunit protein eL22Family
W [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
X [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
X [auth V]IPR000218Large ribosomal subunit protein uL14Family
X [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
Y [auth W]IPR000988Large ribosomal subunit protein eL24-relatedFamily
Y [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Y [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
Z [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Z [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
Z [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Z [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
AA [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth Y]IPR005824KOWDomain
AA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
AA [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
BA [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BA [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BA [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth Z]IPR001141Large ribosomal subunit protein eL27Family
BA [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
CA [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth a]IPR030878Large ribosomal subunit protein uL15Family
CA [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
CA [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth b]IPR002673Large ribosomal subunit protein eL29Family
EA [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
FA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
FA [auth d]IPR000054Large ribosomal subunit protein eL31Family
GA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GA [auth e]IPR001515Large ribosomal subunit protein eL32Family
GA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
HA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
HA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
HA [auth f]IPR001780Large ribosomal subunit protein eL33Family
HA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
IA [auth g]IPR008195Large ribosomal subunit protein eL34Family
IA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
JA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
JA [auth h]IPR001854Large ribosomal subunit protein uL29Family
JA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
JA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
KA [auth i]IPR000509Large ribosomal subunit protein eL36Family
KA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
LA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
LA [auth j]IPR001569Large ribosomal subunit protein eL37Family
LA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
LA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth k]IPR002675Large ribosomal subunit protein eL38Family
MA [auth k]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
D [auth A]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth A]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth A]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth A]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth A]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth A]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth A]IPR002171Large ribosomal subunit protein uL2Family
NA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
NA [auth l]IPR000077Large ribosomal subunit protein eL39Family
NA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
OA [auth m]IPR019954Ubiquitin conserved siteConserved Site
OA [auth m]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
OA [auth m]IPR000626Ubiquitin-like domainDomain
OA [auth m]IPR019956Ubiquitin domainDomain
OA [auth m]IPR001975Large ribosomal subunit protein eL40 domainDomain
OA [auth m]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
QA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth o]IPR000552Large ribosomal subunit protein eL42Family
RA [auth p]IPR002674Large ribosomal subunit protein eL43Family
RA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
SA [auth q]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
SA [auth q]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
SA [auth q]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
SA [auth q]IPR002143Large ribosomal subunit protein uL1Family
SA [auth q]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
TA [auth r]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
TA [auth r]IPR001790Large ribosomal subunit protein uL10Family
TA [auth r]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
TA [auth r]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
TA [auth r]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
VA [auth AA]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
VA [auth AA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
VA [auth AA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
VA [auth AA]IPR001865Small ribosomal subunit protein uS2Family
VA [auth AA]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
WA [auth BB]IPR001593Small ribosomal subunit protein eS1Family
WA [auth BB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
WA [auth BB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
E [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth B]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
E [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth B]IPR000597Large ribosomal subunit protein uL3Family
E [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
XA [auth CC]IPR000851Small ribosomal subunit protein uS5Family
XA [auth CC]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
XA [auth CC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
XA [auth CC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
XA [auth CC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
XA [auth CC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
XA [auth CC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
YA [auth DD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
YA [auth DD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
YA [auth DD]IPR004044K Homology domain, type 2Domain
YA [auth DD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
YA [auth DD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
YA [auth DD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
YA [auth DD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
ZA [auth EE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
ZA [auth EE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
ZA [auth EE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
ZA [auth EE]IPR002942RNA-binding S4 domainDomain
ZA [auth EE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
ZA [auth EE]IPR000876Small ribosomal subunit protein eS4Family
ZA [auth EE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
ZA [auth EE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
ZA [auth EE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
ZA [auth EE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
ZA [auth EE]IPR005824KOWDomain
AB [auth FF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
AB [auth FF]IPR000235Small ribosomal subunit protein uS7Family
AB [auth FF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
AB [auth FF]IPR023798Small ribosomal subunit protein uS7 domainDomain
AB [auth FF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
BB [auth GG]IPR014401Small ribosomal subunit protein eS6-likeFamily
BB [auth GG]IPR001377Small ribosomal subunit protein eS6Family
BB [auth GG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
CB [auth HH]IPR000554Small ribosomal subunit protein eS7Family
CB [auth HH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
DB [auth II]IPR001047Small ribosomal subunit protein eS8Family
DB [auth II]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
DB [auth II]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
DB [auth II]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
EB [auth JJ]IPR002942RNA-binding S4 domainDomain
EB [auth JJ]IPR022801Small ribosomal subunit protein uS4Family
EB [auth JJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
EB [auth JJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
EB [auth JJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
EB [auth JJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
FB [auth KK]IPR037447Small ribosomal subunit protein eS10Family
FB [auth KK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
FB [auth KK]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
FB [auth KK]IPR005326Plectin/eS10, N-terminalDomain
GB [auth LL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
GB [auth LL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
GB [auth LL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
GB [auth LL]IPR000266Small ribosomal subunit protein uS17Family
GB [auth LL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
F [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth C]IPR002136Large ribosomal subunit protein uL4Family
F [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
F [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
F [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
HB [auth MM]IPR000530Small ribosomal subunit protein eS12Family
HB [auth MM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
HB [auth MM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
HB [auth MM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
IB [auth NN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
IB [auth NN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
IB [auth NN]IPR000589Small ribosomal subunit protein uS15Family
IB [auth NN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
JB [auth OO]IPR001971Small ribosomal subunit protein uS11Family
JB [auth OO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
JB [auth OO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
KB [auth PP]IPR002222Small ribosomal subunit protein uS19Family
KB [auth PP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
KB [auth PP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
KB [auth PP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
LB [auth QQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
LB [auth QQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
LB [auth QQ]IPR000754Small ribosomal subunit protein uS9Family
LB [auth QQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MB [auth RR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
MB [auth RR]IPR001210Small ribosomal subunit protein eS17Family
MB [auth RR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
NB [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
NB [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
NB [auth SS]IPR001892Small ribosomal subunit protein uS13Family
NB [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
OB [auth TT]IPR001266Small ribosomal subunit protein eS19Family
OB [auth TT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
OB [auth TT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
OB [auth TT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
PB [auth UU]IPR001848Small ribosomal subunit protein uS10Family
PB [auth UU]IPR027486Small ribosomal subunit protein uS10 domainDomain
PB [auth UU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
PB [auth UU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
PB [auth UU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
QB [auth VV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
QB [auth VV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
QB [auth VV]IPR001931Small ribosomal subunit protein eS21Family
G [auth D]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
G [auth D]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
RB [auth WW]IPR000630Small ribosomal subunit protein uS8Family
RB [auth WW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
RB [auth WW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
SB [auth XX]IPR006032Small ribosomal subunit protein uS12Family
SB [auth XX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SB [auth XX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
TB [auth YY]IPR001976Small ribosomal subunit protein eS24Family
TB [auth YY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
TB [auth YY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
UB [auth ZZ]IPR004977Small ribosomal subunit protein eS25Family
UB [auth ZZ]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
VB [auth aa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
VB [auth aa]IPR000892Small ribosomal subunit protein eS26Family
VB [auth aa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
WB [auth bb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
WB [auth bb]IPR000592Small ribosomal subunit protein eS27Family
WB [auth bb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XB [auth cc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
XB [auth cc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
XB [auth cc]IPR000289Small ribosomal subunit protein eS28Family
YB [auth dd]IPR001209Small ribosomal subunit protein uS14Family
YB [auth dd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
YB [auth dd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
YB [auth dd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
ZB [auth ee]IPR006846Small ribosomal subunit protein eS30Family
AC [auth ff]IPR019954Ubiquitin conserved siteConserved Site
AC [auth ff]IPR000626Ubiquitin-like domainDomain
AC [auth ff]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
AC [auth ff]IPR002906Small ribosomal subunit protein eS31Domain
AC [auth ff]IPR019956Ubiquitin domainDomain
AC [auth ff]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
AC [auth ff]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
H [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
H [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
H [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth E]IPR000915Large ribosomal subunit protein eL6Family
BC [auth gg]IPR019775WD40 repeat, conserved siteConserved Site
BC [auth gg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
BC [auth gg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
BC [auth gg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
BC [auth gg]IPR001680WD40 repeatRepeat
BC [auth gg]IPR020472G-protein beta WD-40 repeatRepeat
DC [auth 1]IPR000795Translational (tr)-type GTP-binding domainDomain
DC [auth 1]IPR029459Elongation factor Tu-type domainDomain
DC [auth 1]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DC [auth 1]IPR015760Translation initiation factor IF- 2Family
DC [auth 1]IPR023115Translation initiation factor IF- 2, domain 3Domain
DC [auth 1]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
DC [auth 1]IPR005225Small GTP-binding protein domainDomain
DC [auth 1]IPR036925Translation initiation factor IF-2, domain 3 superfamilyHomologous Superfamily
I [auth F]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
I [auth F]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
I [auth F]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
I [auth F]IPR039699Large ribosomal subunit protein uL30Family
I [auth F]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
I [auth F]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
I [auth F]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site