6QAJ
Structure of the tripartite motif of KAP1/TRIM28
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | B-box zinc-binding domain | 8089238 | 3001359 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Lysozyme-like | 8033861 | 3001879 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Lysozyme-like | 8033861 | 3001879 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | B-box zinc-binding domain | 8089238 | 3001359 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00959 | e6qajA1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: PF00959 | ECOD (1.6) |
A | PF14634 | e6qajA2 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: PF14634 | ECOD (1.6) |
A | PF00643 | e6qajA3 | A: few secondary structure elements | X: B-box zinc-binding domain-like | H: B-box zinc-binding domain (From Topology) | T: B-box zinc-binding domain | F: PF00643 | ECOD (1.6) |
B | PF00959 | e6qajB2 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: PF00959 | ECOD (1.6) |
B | PF14634 | e6qajB3 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: PF14634 | ECOD (1.6) |
B | PF00643 | e6qajB1 | A: few secondary structure elements | X: B-box zinc-binding domain-like | H: B-box zinc-binding domain (From Topology) | T: B-box zinc-binding domain | F: PF00643 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14634 | zinc-RING finger domain (zf-RING_5) | zinc-RING finger domain | - | Domain | |
PF00643 | B-box zinc finger (zf-B_box) | B-box zinc finger | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001165 | T4-type lysozyme | Family | |
IPR034690 | Endolysin T4 type | Family | |
IPR002196 | Glycoside hydrolase, family 24 | Family | |
IPR023347 | Lysozyme domain superfamily | Homologous Superfamily | |
IPR023346 | Lysozyme-like domain superfamily | Homologous Superfamily | |
IPR001965 | Zinc finger, PHD-type | Domain | |
IPR047058 | Transcription intermediary factor 1-beta, B-box-type 2 zinc finger | Domain | |
IPR042713 | TIF1-beta, RING finger, HC subclass | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR036427 | Bromodomain-like superfamily | Homologous Superfamily | |
IPR003649 | B-box, C-terminal | Domain | |
IPR001841 | Zinc finger, RING-type | Domain | |
IPR001487 | Bromodomain | Domain | |
IPR037373 | Transcription intermediary factor 1-beta, PHD domain | Domain | |
IPR019787 | Zinc finger, PHD-finger | Domain | |
IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
IPR019786 | Zinc finger, PHD-type, conserved site | Conserved Site | |
IPR047059 | Transcription intermediary factor 1-beta, B-box-type 1 zinc finger | Domain | |
IPR000315 | B-box-type zinc finger | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q13263 | :